FC876463

Overview
NameFC876463
Unique NameFC876463
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:2..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR9_HUMAN (Solute carrier family 2, facilitated glucose transporter member 9 OS=Homo sapiens GN=SLC2A9 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 50/243 (20.58%), Postives = 105/243 (43.21%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIY---LIDHFGRKKLALS--SLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            G   TW ++ GV  VPA++  + + F+P+SPR+L + K ++ +A+         A +  E++ + A +  + R  + V  L++ ++  +R                 +N + +Y+ +I   AG                T  + T+  ++   +I+H GR+ L +    L G+    + ++                +++++G+   IA F  G G +P+ L  E + +  R     ++ TVN
Sbjct:  226 GKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYLLLEKHNEARAVKAFQTFLGKADVSQEVEEVLAESRVQ-RSIRLVSVLELLRAPYVRWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGI----PLAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTITLTLQDHAPWVP-----YLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVN 458          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 59/246 (23.98%), Postives = 100/246 (40.65%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE----DEIDHLSAAAEEELRK--KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            W     V  +PA + F+   ++PESPRWLF    +E+AI VL  I ++   +    +EI ++ A  +   R+  K   +     K  ++R                 IN + YYSPT+ +  G                   V TI+  ++L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R + G  S+  N
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGRREEAIKVLCWIRNLEPTDRYIVEEISYIDADLQRYAREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIG-AYIKIAGPGTTKTEEAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSL-GQASAAAN 437          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR5_SHEEP (Solute carrier family 2, facilitated glucose transporter member 5 OS=Ovis aries GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 58/242 (23.97%), Postives = 108/242 (44.63%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG---TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAF---FAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            W  +LG++ +PA++  + + F PESPR+L + K D+E A   L ++     ++ EI+ +     EE R +K   ++ V   FK + +R                 +N + YY+  I   AG + +           GT AV    T+  I++++  GR+ L L   +    +  +L+ A           V  W+  + +A  I++    A G  P+P  L +E++ +  R     ++ TV+
Sbjct:  192 WPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEEAAKRALRRLRGWHDVDAEIEEIL----EEDRAEKAAGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYLSAGVKEDD----VQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGAL------AMQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVH 419          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: RGT2_YEAST (High-affinity glucose transporter RGT2 OS=Saccharomyces cerevisiae GN=RGT2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 64/243 (26.34%), Postives = 104/243 (42.80%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDI----ARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIR----XXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            P ++R  +G+  V + I  V M+F+PESPR+  +K +  KA   LS +  +     RL +E+  + A  + E     +   LD FK+ E R                     IN + YY        G  ++             N   +I G+YL+D  GR+ + L+   GVI+++  L  A I         V   I +  + L+IA F+   G V W +++E+YP   R  C  + +  N
Sbjct:  262 PSSYRIPIGLQYVWSSILAVGMIFLPESPRYYVLKDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPST-LLDCFKTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGVDNS---YLVSFISYAVNVAFSIPGMYLVDRIGRRPVLLA--GGVIMAIANLVIA-IVGVSEGKTVVASKIMIAFICLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAAN 497          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR9_PONAB (Solute carrier family 2, facilitated glucose transporter member 9 OS=Pongo abelii GN=SLC2A9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 49/241 (20.33%), Postives = 104/241 (43.15%), Query Frame = 1
Query:    7 GVPGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIY---LIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            G   TW ++ GV  VPA++  + + F+P+SPR+L + K ++ +A+         A +  E++ ++ +  +  R  + V  L++ ++  +R                 +N + +Y+ +I   AG    +           T  + T+  I+   +I+H GR+ L    + G  +  +      +            +++++G+   IA F  G G +P+ L  E + +  R     ++ TVN
Sbjct:  226 GKESTWPYLFGVIVVPAVVQLLSLPFLPDSPRYLLLEKRNEARAVKAFQTFLGKADVSREVEEVAESRVQ--RSIRLVSVLELLRAPYVRWQVVTVIVTMACYQLCGLNAIWFYTNSIFGKAGIPPAK----IPYVTLSTGGIETLAAIFSGLVIEHLGRRPLL---IGGFGLMALFFGTLTVTLTLQDRAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVN 457          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 58/246 (23.58%), Postives = 99/246 (40.24%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKI----YDIAR----LEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIV------GIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR +  V  VP + H   + F+PESPRWL      ++    L ++     DI+R    + D ID      E ++ +    RY                            + V YY+ ++    GF S            GT+ + TI+         L+D  GR+ L ++S + + +S +LLS ++          +      IG+  +I  FA GMG +PW + +E++P   +   G + +  N
Sbjct:  209 WRLLTVVGLVPCVFHVFCLFFIPESPRWLAKLGRDKECRSSLQRLRGSDVDISREANTIRDTIDMTENGGETKMSELFQRRYA---------YPLIIGVGLMFLQQLCGSSGVTYYASSLFNKGGFPS----------AIGTSVIATIMVPKAMLATVLVDKMGRRTLLMASCSAMGLSALLLSVSYGFQSFGILPELTPIFTCIGVLGHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTVTN 435          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 54/226 (23.89%), Postives = 95/226 (42.04%), Query Frame = 1
Query:   13 PGTWRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV--YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYR 684
            P  WR  LG + +PA+I     L + E+P  L  ++  ++    L KI  +  +++E + +  A   ++ ++    Y  + K    R                 IN +M+Y+P + Q  GF  N             N + T VGI+L+D  GR+ L L S   ++I  +++                    + VI + +Y+  FA   GP+ W + SE +P + R
Sbjct:  195 PYGWRIALGGAGIPALILLFGSLLICETPTSLIERNKTKEGKETLKKIRGVEDVDEEYESIVHAC--DIARQVKDPYTKLMKPAS-RPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTVGF-GNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILAKDLDVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETR 416          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 57/246 (23.17%), Postives = 101/246 (41.06%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLE----DEIDHLSAAAEEELRK--KKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            W     V  +PA + F+   ++PESPRWLF    +E+A+ VL  + ++   +    +E+ ++ A  E   R+  K   +     K ++++                 IN + YYSPT+ +  G                   V TIV  ++L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R + G  S+  N
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGKREEAMKVLCWMRNLEPTDRYIVEEVSYIDADLERYAREVGKGFWKPFLSLKQRKVQWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIG-AYIKIAGPGSTKAEDAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSL-GQASAAAN 437          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: GTR5_BOVIN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Bos taurus GN=SLC2A5 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 58/242 (23.97%), Postives = 107/242 (44.21%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDV---FKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG---TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAF---FAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            W  +LG++ +PA++  + + F PESPR+L + K D+  A   L ++     ++ EI+ +     EE R +K V ++ V   FK + +R                 +N + YY+  I   AG   +           GT AV    T+  I++++  GR+ L L   +    +  +L+ A           V  W+  + +A  I++    A G  P+P  L +E++ +  R     ++ TV+
Sbjct:  192 WPILLGLTGIPAVLQLLFLPFFPESPRYLLIQKKDEAAAKSALRRLRGWHDVDAEIEEIL----EEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYLSAGVNEDD----VQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGAL------ALQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVH 419          
BLAST of FC876463 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.933e-11
Identity = 54/236 (22.88%), Postives = 99/236 (41.95%), Query Frame = 1
Query:   22 WRWMLGVSAVPAIIHFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRXXXXXXXXXXXXXXXXXINTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV----LLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSSTVN 717
            WR  LG++ VPA++  +  L +P++P  L  +   E+A  +L  I     +++E   L  A+EE  + K   + + +      R                 IN + +Y+P + Q  GF S                + T V ++ +D FGR+ L L     +++S +    ++   F              + V  + +Y+A FA   GP+ W + SE+ P + R     ++ +VN
Sbjct:  200 WRISLGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDEEFQDLIDASEESKQVKHPWKNIML---PRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGI-IELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALICIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVN 431          
The following BLAST results are available for this feature:
BLAST of FC876463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
GTR9_HUMAN1.035e-1120.58Solute carrier family 2, facilitated glucose trans... [more]
QAY_NEUAF1.352e-1123.98Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
GTR5_SHEEP1.352e-1123.97Solute carrier family 2, facilitated glucose trans... [more]
RGT2_YEAST2.306e-1126.34High-affinity glucose transporter RGT2 OS=Saccharo... [more]
GTR9_PONAB2.306e-1120.33Solute carrier family 2, facilitated glucose trans... [more]
ERD6_ARATH2.306e-1123.58Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
STP8_ARATH3.011e-1123.89Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
QAY_NEUTR3.011e-1123.17Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
GTR5_BOVIN3.011e-1123.97Solute carrier family 2, facilitated glucose trans... [more]
STP4_ARATH3.933e-1122.88Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2CA12RM1 EHR Citrus clementina cDNA clone KN0AAN2CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876463 ID=FC876463; Name=FC876463; organism=Citrus clementina; type=EST; length=717bp
GCACGAGGGGTCCCTGGAACATGGAGATGGATGCTTGGAGTATCAGCTGT
GCCAGCTATCATTCACTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCTA
GATGGCTTTTCATGAAGAGTGACAAAGAAAAAGCCATTTTGGTTCTTTCT
AAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAGC
TGCTGCAGAGGAAGAACTCCGAAAAAAGAAAACTGTCAGATACTTGGATG
TTTTTAAATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACTT
CAGGCATTTCAACAGTTCACTGGTATCAACACAGTCATGTACTACAGCCC
GACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCC
TATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAATT
TATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGC
TGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGAT
CATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTA
GCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGAC
TCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGTA
TGTCATCTACTGTGAAC
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