FC877780

Overview
NameFC877780
Unique NameFC877780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length828
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC877780_ssr65 microsatellite FC877780_ssr65:65..76. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig4349 contig Ccv1_Contig4349:26..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.917e-56
Identity = 113/193 (58.55%), Postives = 138/193 (71.50%), Query Frame = 2
Query:  251 SRACSKEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTGGP-PFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            S    +E++E AR PE   WLR +RR IHQ+PELAFQE  TS L+RAELD + + Y +P+A+TG+ A V G  GP P  ALRADMDALPIQE VEWE+KS   GKMHACGHDAHVAML+ AAK+L+SR     G V L+FQPA E G G   ++ +G L+D + IFAVHV+ + P GV+GSRPGP LAG   F
Sbjct:    2 STTLGRELLEAARAPEFAGWLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPIAQTGVVATVAGAAGPGPVFALRADMDALPIQEMVEWEFKSLEDGKMHACGHDAHVAMLLVAAKLLQSRRDHFNGKVKLVFQPA-EGGAGGYHVLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARF 193          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.682e-56
Identity = 107/201 (53.23%), Postives = 143/201 (71.14%), Query Frame = 2
Query:  233 SSCGVWSRACSKE-VMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGP---PFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            +S   W+ A   + ++  AR P   +WLR VRR IH++PELAF+E  TS L+RAELD + + Y++P+A+TG+ A +  GG    P VALRADMDALP+QE V+WE+KS+  GKMHACGHDAH AML+GAAK+L+ R++ LKGTV L+FQPAEE   GA  ++ +G L+DV A+F +HV    P GV+ +RPGP  A  G F
Sbjct:   25 ASASAWAAAAGDDDLLAAAREPGMAEWLRGVRRRIHRHPELAFEEVRTSELVRAELDAIGVPYQWPVARTGVVATIAGGGGGDGPVVALRADMDALPVQELVDWEHKSQENGKMHACGHDAHTAMLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRF 225          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL3_ORYSJ (IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.331e-55
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 2
Query:  266 KEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV-GTGGP-PFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            +E++E AR PE   WLR +RR IHQ+PELAFQE  TS L+RAELD + + Y +P+A+TG+ A V G  GP P   LRADMDALPIQE VEWE+KS   GKMHACGHD HVAML+GAAK+L+SR     G V L+FQPAEE   G   ++ +GA++DV+ IF +HV    P GV+ SRPGP LAG   F
Sbjct:   11 RELLEAARAPEFAGWLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPVAQTGVVATVVGAAGPGPVFGLRADMDALPIQEMVEWEFKSLEDGKMHACGHDVHVAMLLGAAKLLQSRRDHFNGKVKLVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARF 198          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.648e-55
Identity = 103/173 (59.54%), Postives = 128/173 (73.99%), Query Frame = 2
Query:  305 DWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            +WL SVRR IH+NPEL F+  +TS L+R ELD + + Y YP+AKTGI A +G+G PP VALRADMDALP+QE VEW++KSK+ GKMHACGHD+H  ML+GAAK+L  R+ +L GTV L+FQPAEE G GA  M+ +GAL D EAIF +HV    PTG + +  GP LA    F
Sbjct:   39 EWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAKTGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKLLSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEGALGDSEAIFGMHVHTGLPTGELATISGPALASTSIF 211          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53
Identity = 102/192 (53.12%), Postives = 133/192 (69.27%), Query Frame = 2
Query:  254 RACSKEVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV--GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            +A  ++++  A       WL  +RR IHQ PELAFQE  TS L+RAELD + + Y +P+A+TG+ A +  G G  P VALRADMDALP+QE V+WE+KS+  GKMHACGHDAHV ML+GAAK+L+SR+  LKGT+ L+FQPAEE   GA  ++  G L+DV  IF +HV    P GV+ SRPGP ++    F
Sbjct:   38 KALGEDLLAAAGAAGFAGWLSGLRRRIHQRPELAFQEVRTSELVRAELDAIGVPYAWPVARTGVVATIDGGAGAGPVVALRADMDALPLQELVDWEFKSQEKGKMHACGHDAHVTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARF 229          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.914e-53
Identity = 102/189 (53.97%), Postives = 136/189 (71.96%), Query Frame = 2
Query:  269 EVMELARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV----GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            E++  AR P    WLR +RR+IH++PELAF+E  TS L+RAELD + + Y++P+A+TG+ A +    G G     ALRADMDALP+QE V+WE+KS+ +GKMHACGHDAH  ML+GAAK+L+S++  LKGTV L+FQPAEE   GA+ ++ +G L+DV AIF +HV      G + SRPGP LA  G F
Sbjct:   52 ELLSAARAPGFAAWLRGLRRSIHRHPELAFEEVRTSELVRAELDAIGVPYEWPVARTGVVATIAGGDGAGAGTVFALRADMDALPLQELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRF 240          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.482e-52
Identity = 105/181 (58.01%), Postives = 129/181 (71.27%), Query Frame = 2
Query:  281 LARRPETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            L R  E  DW+  VRR IH +PELAF+E  TS L+R EL+R+ +  +  +A TG+ A VG+G PP VALRADMDALP+QE VEWE+KSKV G MHACGHD H AML+GAAK+L  R+  +KGTV L+FQPAEE G GA  M+ DG L+ VEAIF +HV +  PTGVI +  GP  A   F+
Sbjct:   27 LRRAEEERDWMVGVRRRIHAHPELAFREHHTSALVRDELERLGLTAR-AVAGTGVVADVGSGLPPVVALRADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQPAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFY 206          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.072e-37
Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  296 ETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEI----GYKYPLAKTG-IRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG--NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 808
            E  DW+  +RR IH+NPEL+++E+ TS+L+   L ++ I    G   P A  G IR   G      VALRADMDALP++E  + E+KSKV G MHACGHD HVAML+G A +L   + L+ G + LIFQPAEE G   GAK M+  G +  V+ +F +H+S  +P+GV  +R GP++A
Sbjct:   13 EIEDWIIQIRRKIHENPELSYKEYSTSKLVAETLRKLGIEVEEGVGLPTAVVGKIR---GNKPGKTVALRADMDALPVEETSDVEFKSKVKGVMHACGHDTHVAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMA 187          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.319e-37
Identity = 83/178 (46.63%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  296 ETVDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRM----EIGYKYPLAKTG-IRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAG--NGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 808
            E  DW+  +RR IH+ PEL+++E+ TS+L+   L ++    E G   P A  G IR   G+     VALRADMDALP++E  + E+KSKV G MHACGHD HVAML+G A +L   + L+ G + LIFQPAEE G   GAK M+  G +  V+ +F +H+S  +P+GV  +R GP++A
Sbjct:   13 EIEDWIIQIRRKIHEYPELSYKEYNTSKLVAETLRKLGVEVEEGVGLPTAVVGKIR---GSKPGKTVALRADMDALPVEENTDLEFKSKVKGVMHACGHDTHVAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMA 187          
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: YXEP_BACSU (Uncharacterized hydrolase yxeP OS=Bacillus subtilis GN=yxeP PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.235e-35
Identity = 81/173 (46.82%), Postives = 108/173 (62.43%), Query Frame = 2
Query:  311 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFF 823
            L ++RR +H++PEL+FQE ET++ +R  L+  +I     P  KTG+ A + G    P +A+RAD+DALPIQE     + SKV G MHACGHD H A +IG A +L  R   LKGTV  IFQPAEE   GA++++  G L  V AIF +H   + P G IG + GPL+A    F
Sbjct:   10 LINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRF 182          
The following BLAST results are available for this feature:
BLAST of FC877780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
ILL4_ORYSJ3.917e-5658.55IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILL9_ORYSJ6.682e-5653.23IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]
ILL3_ORYSJ4.331e-5557.98IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sati... [more]
ILL3_ARATH9.648e-5559.54IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL8_ORYSJ6.914e-5353.13IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL7_ORYSJ6.914e-5353.97IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL5_ORYSJ4.482e-5258.01IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
CBPX2_SULSO1.072e-3747.19Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]
CBPX1_SULSO5.319e-3746.63Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
YXEP_BACSU2.235e-3546.82Uncharacterized hydrolase yxeP OS=Bacillus subtili... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA74DD12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA74DD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877780 ID=FC877780; Name=FC877780; organism=Citrus clementina; type=EST; length=828bp
TTTCTCTGCAAACATGAAGCTTCAAAAACTCTCTGTGGCGTTTAAAATCT
TGAGCTTCAATTTAATTATTATTATTCTCCTGCAAGTTGAATCCTTAACG
CCGGCGAACAACGACTACGCTTTCTTTGACATAAACTCGTTGGGCTCATC
AACAATAGCAGCAACAACGCCGGCTTGGAAACCCGACGGCGGCAGCGTCA
AGAACCGATCGTCGACGTCACGGAAGCCGTTTTCGAGCTGCGGAGTGTGG
AGCAGGGCGTGCTCGAAGGAGGTGATGGAGCTGGCGCGGCGGCCGGAGAC
GGTGGATTGGCTGAGGAGTGTGAGGAGAACGATTCATCAGAATCCGGAGC
TTGCTTTTCAAGAATTTGAAACCAGCAGGCTCTTGAGGGCCGAGTTGGAT
CGGATGGAGATTGGATACAAATACCCGTTGGCCAAAACAGGTATCCGGGC
ATGGGTCGGGACAGGCGGACCGCCGTTTGTTGCCCTCAGAGCTGACATGG
ATGCACTTCCGATTCAGGAAGCCGTCGAGTGGGAATACAAAAGCAAAGTG
GCTGGCAAAATGCATGCCTGTGGACACGATGCGCACGTTGCCATGCTCAT
CGGTGCGGCCAAGATCTTGAAGAGCCGCGAACATCTTTTAAAGGGAACTG
TAATCTTGATATTCCAGCCAGCGGAGGAAGCTGGCAATGGTGCAAAAAGG
ATGATGGCTGATGGGGCTCTAGAAGATGTCGAGGCAATATTCGCCGTTCA
CGTGTCCCACGAGCATCCTACCGGTGTCATTGGTTCCAGGCCAGGTCCTT
TGCTAGCCGGCTGTGGCTTTTTCCATGC
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