FC877780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.979e-21 Identity = 65/170 (38.24%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 311 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIG-YKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALE--DVEAIFAVHVSHEHPTGVIGSRPGPLLA 808 L S+RR +HQ PEL F+EF+T L LD + +TG+ V GT A RADMD L I E + ++S GKMHACGHD H+ + +G I +K ++ +FQPAEE GA+ M+ L+ + I A+H++ E+P G I ++PG L A Sbjct: 7 LISIRRDLHQIPELGFKEFKTQAYLINHLDAYSKDRIEMETWRTGLFVKVKGTNPERVFAYRADMDGLSIPEDTGYPFQSVHEGKMHACGHDLHMTIALGV--IDHFVHEPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFA 174
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_LISIV (Putative N-acetyldiaminopimelate deacetylase OS=Listeria ivanovii GN=dapL PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.115e-21 Identity = 60/168 (35.71%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 317 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMM--ADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 808 S+RR +HQ PE ++E++T L ++++ Y + +TG+ V GT + R D+DALPI E ++SK AG MHACGHD H+++ +G S+ K ++ +FQPAEE GAK +M A+ A ++I+ +H++ E+ G I +PG L A Sbjct: 8 SIRRELHQIPETGYKEWKTQAYLLDYINKLPSRYLEVKKWRTGLLVRVSGTSPTKTIGYRTDIDALPITEETGLAFESKHAGNMHACGHDLHMSIALGVLTHFASKP--AKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGQIAIKPGLLFA 173
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.190e-20 Identity = 58/168 (34.52%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 317 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED--VEAIFAVHVSHEHPTGVIGSRPGPLLA 808 ++RR +HQ PE ++E +T L + ++ G+ + +TGI V GT + R D+DALPI E E + SK G MHACGHD H+++ +G S+ K ++ +FQPAEE GAK +M + ++I+ +H++ E+ G I +PG L A Sbjct: 7 AIRRELHQIPETGYKELKTQAYLLDYISKLPSGHLEVKKWRTGILVLVKGTNPEKTIGYRTDIDALPITEETELPFASKHPGNMHACGHDLHMSIALGVLTHFASKP--AKDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFA 172
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_BACLD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dapL PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.190e-20 Identity = 64/179 (35.75%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 302 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAW--------VGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDVE--AIFAVHVSHEHPTGVIGSRPGPLLA 808 +D L ++RR +HQ PEL FQE++T L L K+P + I W GT +A RADMD L I+E + + S +MHACGHD H+ + +G I H +K ++ +FQPAEE GA+ M+ + E I A+H++ E P G IG++ G L A Sbjct: 3 LDELAAIRRDLHQIPELGFQEYKTQAYLLNHLA------KHPEGRIEIEKWRTGLFVKVKGTAPEKILAYRADMDGLSIREDTGYSFSSVHQDRMHACGHDFHMTIALGI--IDHFVRHPVKQDLLFLFQPAEEGPGGAEPMLESDLFKKWEPSMITALHIAPELPVGTIGTKSGLLFA 173
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_BACSU (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus subtilis GN=dapL PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.555e-20 Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = 2 Query: 302 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV--------GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALE--DVEAIFAVHVSHEHPTGVIGSRPGPLLA 808 ++ L ++RR +H+ PEL FQEF+T + L L++ YP + I W GT +A RAD+DAL I+E + S+ G MHACGHD H+ + +G I H +K ++ +FQPAEE GA+ M+ L+ + I A+H++ E P G I ++ G L A Sbjct: 3 IEELIAIRRDLHRIPELGFQEFKTQQYLLNVLEQ------YPQDRIEIEKWRTGLFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLHMTIALGI--IDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWQPDFITALHIAPELPVGTIATKSGLLFA 173
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_LACS1 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=dapL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.464e-20 Identity = 61/182 (33.52%), Postives = 89/182 (48.90%), Query Frame = 2 Query: 311 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGYKYPLAKTGIRAWV--------GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED--VEAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFH 826 L +RR +HQ PE+ +E+ETS L ++I P I+ W G + R D+D LP++E + SK G+MHACGHD H+ + +G S H K + IFQPAEE +G ++ G L++ + I+A+H + + P G IG R G L AG H Sbjct: 8 LIKIRRDLHQIPEIGLEEYETSDYL------LKIINGLPQENLEIKRWKTAILVHLNGENKNYTIGYRTDIDGLPVEEKTGLPFSSKHEGRMHACGHDIHMTVALGVLSYFAS--HRPKYNMTFIFQPAEENASGGMKLYQSGELDEWMPDEIYALHDNPQLPAGTIGCRKGTLFAGTCEIH 181
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.464e-20 Identity = 61/179 (34.08%), Postives = 94/179 (52.51%), Query Frame = 2 Query: 302 VDWLRSVRRTIHQNPELAFQEFETSRLLRAELDRM-EIGYKYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALEDV--EAIFAVHVSHEHPTGVIGSRPGPLLAGCGFFH 826 +++ +RR +H+ PE F+EF+T + ++ E Y +TG+ V G G + RAD+D LPI+EA + S+ G MHACGHD H ++ +G + + E + V+ +FQPAEE GA+ M+ E ++ +HV+ E+P G I SRPG L A H Sbjct: 1 MEYAIEMRRELHKIPEPGFKEFKTQAFILDQIRSYPEDRVSYDTFETGVFVRVKGLTGNRTIGYRADIDGLPIEEATGLPFCSEHPGFMHACGHDVHASIALGLLR--RIVELPVMDDVVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVH 177
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.908e-20 Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 311 LRSVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWVG-TGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMM--ADGALEDVEAIFAVHVSHEHPTGVIGSRPGPLLA 808 L VRR +H+ PEL F+E++T L + + + + KTGI VG G VA RADMD LPI E + S+ G+MHACGHD H+ + G + H + ++ IFQPAEE GAK M+ + + + I A+H++ E+P G I +R G L A Sbjct: 5 LIDVRRALHRIPELGFEEYKTQTYLLDLIQSLPQDFLEVKTWKTGILVRVGGRKGEKTVAYRADMDGLPITEETGLPFVSQHEGRMHACGHDLHMTIAFGLLR--HFAYHQPETHLLFIFQPAEEGPGGAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFA 172
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_LISIN (Putative N-acetyldiaminopimelate deacetylase OS=Listeria innocua GN=dapL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.716e-20 Identity = 57/168 (33.93%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 317 SVRRTIHQNPELAFQEFETSRLLRAELDRMEIGY-KYPLAKTGIRAWV-GTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED--VEAIFAVHVSHEHPTGVIGSRPGPLLA 808 ++RR +HQ PE ++E +T L + ++ + + +TGI V GT + R D+DALPI E ++SK AG MHACGHD H+++ +G S+ K ++ +FQPAEE GAK +M + + I+ +H++ E+ G I +PG L A Sbjct: 7 AIRRDLHQIPETGYKELKTQAYLLDYISKLPNEFLEIKKWRTGILVLVKGTNPGKTIGYRTDIDALPITEETGLPFESKHAGNMHACGHDLHMSIALGVLTHFASKP--AKDNLLFVFQPAEEGPGGAKPIMESAEFSEWRPDTIYGLHIAPEYKVGQIAIKPGLLFA 172
BLAST of FC877780 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.245e-19 Identity = 60/175 (34.29%), Postives = 88/175 (50.29%), Query Frame = 2 Query: 311 LRSVRRTIHQNPELAFQEFETSRLLRAEL-----DRMEIGYKYPLAKTGIRAWVGTGGPPFVALRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMMADGALED---VEAIFAVHVSHEHPTGVIGSRPGPLLAG 811 L +RR +H NPE+ QE +T + L ++ + + I + + G+ +ALR DMDALPIQE ++ SK MHACGHD H+ + +G +H K +++ FQPAEE G KR G + + +A+HV+ + P G I SR G L AG Sbjct: 7 LIKIRRHLHANPEIGMQEVKTHQFLLEQIAKFPQENLTIETISEIPTALLVRIAGSDPKRTIALRTDMDALPIQEETGLDFASKNDHVMHACGHDIHMTVALGILSYF--AKHQPKDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAG 179 The following BLAST results are available for this feature:
BLAST of FC877780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877780 ID=FC877780; Name=FC877780; organism=Citrus clementina; type=EST; length=828bpback to top |