FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_COXBN (4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ubiA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 76/206 (36.89%), Postives = 110/206 (53.40%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L +Q   Y +L R DKP+G +LL WP +W++ +AA     P FK+               C VND  DR +D  V+RT++RP+ASG ++                      N  +  L    +LL   YP +KRFT  PQ +LG+ F+W   + +AA  G +  AV + ++ + V W +VYDT YA  D+EDD+KVG+KSTA+ FG
Sbjct:    4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIVYDTQYAMIDREDDVKVGIKSTAILFG 206          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_COXB2 (4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=ubiA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 76/206 (36.89%), Postives = 110/206 (53.40%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L +Q   Y +L R DKP+G +LL WP +W++ +AA     P FK+               C VND  DR +D  V+RT++RP+ASG ++                      N  +  L    +LL   YP +KRFT  PQ +LG+ F+W   + +AA  G +  AV + ++ + V W +VYDT YA  D+EDD+KVG+KSTA+ FG
Sbjct:    4 LRQQMPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPFLKRFTHLPQLWLGVAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIVYDTQYAMIDREDDVKVGIKSTAILFG 206          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEB9 (4-hydroxybenzoate octaprenyltransferase OS=Shewanella baltica (strain OS195) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 74/214 (34.58%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y++L R+D+PIGT LL WPC+ ++ +AA  G  PD K++              C +ND  DRD+D+ VERTR RP+ASG ++                      N     L    ++L   YP  KR T  PQ +LG+ ++W   + +AA  G + +   + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F +A +
Sbjct:   10 YSRLTRIDRPIGTLLLLWPCLMALMLAA--GGMPDLKVLVIFIIGVVIMRACGCIINDYADRDLDSFVERTRSRPLASGEISTKEALILFVILGLSAFGLVLLLNGLVVKLSVVGIILTIIYPFTKRITNMPQMFLGIVWSWSIPMAYAAQTGEVPMEAWW-LFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIGLFQLAAL 220          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEB8 (4-hydroxybenzoate octaprenyltransferase OS=Shewanella baltica (strain OS185) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 74/214 (34.58%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y++L R+D+PIGT LL WPC+ ++ +AA  G  PD K++              C +ND  DRD+D+ VERTR RP+ASG ++                      N     L    ++L   YP  KR T  PQ +LG+ ++W   + +AA  G + +   + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F +A +
Sbjct:   10 YSRLTRIDRPIGTLLLLWPCLMALMLAA--GGMPDLKVLVIFIIGVVIMRACGCIINDYADRDLDSFVERTRSRPLASGEISTKEALILFVILGLSAFGLVLLLNGLVVKLSVVGIILTIIYPFTKRITNMPQMFLGIVWSWSIPMAYAAQTGEVPMEAWW-LFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIGLFQLAAL 220          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEB2 (4-hydroxybenzoate octaprenyltransferase OS=Shewanella baltica (strain OS223) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 74/214 (34.58%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y++L R+D+PIGT LL WPC+ ++ +AA  G  PD K++              C +ND  DRD+D+ VERTR RP+ASG ++                      N     L    ++L   YP  KR T  PQ +LG+ ++W   + +AA  G + +   + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F +A +
Sbjct:   10 YSRLTRIDRPIGTLLLLWPCLMALMLAA--GGMPDLKVLVIFIIGVVIMRACGCIINDYADRDLDSFVERTRSRPLASGEISTKEALILFVILGLSAFGLVLLLNGLVVKLSVVGIILTIIYPFTKRITNMPQMFLGIVWSWSIPMAYAAQTGEVPMEAWW-LFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIGLFQLAAL 220          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSEU5 (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 74/203 (36.45%), Postives = 110/203 (54.19%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + +L RLDKPIGT+LL WP +W++ +AA     P  K +              C VND  DR+ D  V+RT+ RP+A+G ++                      N  +  L   +L L   YP MKR+TF+PQ  LG  F+WG  + + A  GSL     + ++I+ + WT+ YDT YA  D++DDLK+G+KSTA+ FG++ +
Sbjct:   19 FIQLMRLDKPIGTYLLLWPTLWALWIAAEG--VPSAKNLFIFITGVILMRAAGCVVNDFADRNFDGHVQRTQARPMAAGRVSSREAWTLFAVLVGLSFGLVLLTNATTVYLSFGALALAACYPFMKRYTFYPQVVLGAAFSWGMPMAFTAETGSLP-PEAWLLFIANLLWTVAYDTYYAMADRDDDLKIGIKSTAILFGEADR 218          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_MARAV (4-hydroxybenzoate octaprenyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 78/219 (35.62%), Postives = 111/219 (50.68%), Query Frame = 1
Query:  250 IDLYLPRQARA----YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNN-FSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + + LP    A    YA+L R+D+PIGT LL WP  W++ +AA  G  P F  +              C +ND  DRD D  V+RT+ RP+ +G +                        N  +  L     LL F YP MKR+T  PQ +LG  F+W   + WAA    L   + + ++ + V WT+ YDT+YA  D++DDLKVG+KSTA+ FGD+ +
Sbjct:    2 LQITLPTHVHARLADYARLLRIDRPIGTLLLLWPTYWALWLAAEGG--PSFANLVIFTLGVFFMRAAGCAINDFADRDWDRHVKRTKDRPLTAGRVRAWEAVALFAGLCLVSFLMVVLFTNTLTLYLSFGGALLAFIYPFMKRYTHLPQLFLGAAFSWAIPMAWAAEANQLS-QLTWLLFTANVLWTVAYDTLYAMVDRDDDLKVGIKSTAILFGDADR 217          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_AZOSE (4-hydroxybenzoate octaprenyltransferase OS=Azoarcus sp. (strain EbN1) GN=ubiA PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L RLDKPIG  LL WP +W++ +AA    FP   ++              C +ND  DRD D  VERTR RP+ +G +T                      +   R L   +L L  SYP  KRF   PQAYLG+ F +G  +G+AAV+G +  A+ + + ++ +FW + YDT YA  D+ DDLK+G+K++A+ FG
Sbjct:   14 YLRLMRLDKPIGILLLMWPTLWALWLAADG--FPPLHLIVIFALGTVLMRSAGCVINDYADRDFDGHVERTRTRPLTTGAVTVREALLLAAGLSLVSFVLILPLDPLVRWLSLPALFLAASYPYTKRFLAIPQAYLGIAFGFGIPMGFAAVQGEVP-AIAWLLLLANIFWAVAYDTEYAMVDRPDDLKIGIKTSAITFG 209          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ALHEH (4-hydroxybenzoate octaprenyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.515e-33
Identity = 75/211 (35.55%), Postives = 113/211 (53.55%), Query Frame = 1
Query:  259 YLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            YL  +A  YA+L RL++PIG +LL WP +W + +AA     PD K++              C +ND  DRD D  V+RT  RP+A+G ++                      N  +  L   ++ L  +YP MKR+T +PQ +LG  F W   + +AA  G++   V + +++S V W  +YDT YA  D++DDLK+GVKSTA+ FG + +
Sbjct:    7 YLRDRAWQYAQLTRLNRPIGNFLLLWPMLWGLWIAAKG--LPDLKVLVVFVLGVLIMRAAGCVINDYADRDFDGHVKRTTHRPMANGRVSEREALTLFVVLCLVAFGLVLLMNPLTIALSLVAVALAATYPFMKRYTHFPQVHLGAAFGWAIPMAFAAQTGAV-APVAWLLFLSAVLWATIYDTQYAMVDRDDDLKIGVKSTAVLFGQADR 214          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHESH (4-hydroxybenzoate octaprenyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=ubiA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.203e-33
Identity = 77/214 (35.98%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y +LAR+D+PIGT LL WPC+ ++ +AA  G  PD K++              C +ND  DRD+D  V+RT+ RP+ASG +T                      N     L    ++L   YP  KRFT  PQ +LG+ ++W   + +AA  G +  A  + ++ +   WT+ YDT+YA  D+EDDLKVG+KSTA+ FG   ++    F +A +
Sbjct:   10 YLRLARMDRPIGTLLLLWPCLMALLLAA--GGMPDLKVLTIFIFGVVVMRACGCIINDYADRDLDAHVDRTKSRPLASGEVTGREALILFAVMGLFAFGLVLMLNPLVVKLSVVGIILTIIYPFTKRFTNMPQMFLGVVWSWSIPMAYAAQTGEVP-AEAWWLFAANWCWTVAYDTMYAMVDREDDLKVGIKSTAILFGKYDRQIIGLFQLAAL 220          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_COXBN4.223e-3336.894-hydroxybenzoate octaprenyltransferase OS=Coxiell... [more]
UBIA_COXB24.223e-3336.894-hydroxybenzoate octaprenyltransferase OS=Coxiell... [more]
UBIA_SHEB95.515e-3334.584-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_SHEB85.515e-3334.584-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_SHEB25.515e-3334.584-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_PSEU55.515e-3336.454-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_MARAV5.515e-3335.624-hydroxybenzoate octaprenyltransferase OS=Marinob... [more]
UBIA_AZOSE5.515e-3337.694-hydroxybenzoate octaprenyltransferase OS=Azoarcu... [more]
UBIA_ALHEH5.515e-3335.554-hydroxybenzoate octaprenyltransferase OS=Alkalil... [more]
UBIA_SHESH7.203e-3335.984-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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