FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NITOC (4-hydroxybenzoate octaprenyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.669e-32
Identity = 74/203 (36.45%), Postives = 107/203 (52.71%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            YA+L RLD+P+G +LL WP +W++ +A      PD K++              C +ND  DR  D  V+RT  RP+A+G  +                      N  +  L  +  LL  +YP MKR+T WPQAYLG  F W   + +AA  G++ +A  + ++I+ V W  VYDT Y   D+EDDL +GVKSTA+ FG+  +
Sbjct:    8 YAQLMRLDRPVGIFLLLWPTLWALWIAGAGQ--PDPKVLLVFVAGVALMRSAGCVINDFADRAFDPHVKRTINRPLATGKASSQEALLLFAGLCLVAFGLVLLLNPLTIGLSFAGALLAATYPFMKRYTHWPQAYLGAAFGWAVPMAFAAQTGTVPIA-AWLLFIATVLWATVYDTFYGMVDREDDLLIGVKSTAILFGEGDR 207          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NEIMB (4-hydroxybenzoate octaprenyltransferase OS=Neisseria meningitidis serogroup B GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.669e-32
Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L L  +   Y +L R DKPIGT LL WP  W++ +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + ++   +L L  +YP  KRF   PQ YLGL F++G  + +AAV G++     + ++ + V WTL YDT+YA  DKEDDLK+G+K++A+ FG
Sbjct:    9 LRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIPMAFAAVAGNVP-PQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFG 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_RALSO (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia solanacearum GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P +   YA+L R+DKPIGT LL WP +W++ MAA  GH P   ++              C +ND  DRD D  V+RTR RP+ +GL+ P                     N  ++ L  +++L+  +YP  KRF   PQAYLG+ F +G  + +AAV+  +  A  + M  + V W + YDT YA  D++DDL +G++++A+ FG
Sbjct:    8 PSRLALYARLVRIDKPIGTLLLLWPTLWAMWMAA-DGH-PPPALVAIFVVGTVLMRSAGCAINDWADRDFDKHVKRTRERPLTAGLIAPWEALAVAAVLALVAFTLILPLNALTKWLSVAAVLIAGTYPFFKRFFAIPQAYLGIAFGFGIPMAYAAVQDQVP-APAWLMLAANVLWAIAYDTAYAMVDRDDDLLIGIQTSAITFG 209          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSESM (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv. tomato GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 73/210 (34.76%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            L  +A  + +L R+DKPIG +LL WP +W++ +A      P    +              C +ND  DR +D  V+RT  RP+ SG ++                      N+ +  L    L L   YP MKR+T++PQ  LG  F+WG  + + A  G L  A  + +YI+ + WT+ YDT YA  D++DDLK+GVKSTA+ FGD+ +
Sbjct:   12 LSPRAWDFVQLTRIDKPIGIYLLLWPTLWAVWIAGKGS--PSLNTVFIFVAGVFLMRAAGCVINDFADRKVDGHVKRTEQRPLVSGKVSSREALVLFAVLVSLSFVLVLFTNSTTIWLSFGGLALAACYPFMKRYTYYPQVVLGAAFSWGMPMAFTAETGELP-AAAWLLYIANLLWTVGYDTYYAMVDRDDDLKIGVKSTAVLFGDADR 218          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PSE14 (4-hydroxybenzoate octaprenyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 74/210 (35.24%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            L  +A  + +L R+DKPIG +LL WP +W++ +A      P  K +              C +ND  DR +D  V+RT  RP+ SG ++                      N  +  L    L L   YP MKR+T++PQ  LG  F+WG  + + A  G L  A  + +YI+ + WT+ YDT YA  D++DDLK+GVKSTA+ FGD+ +
Sbjct:   12 LSPRAWDFIQLTRIDKPIGIYLLLWPTLWAVWIAGKGS--PSLKTVFIFVVGVFLMRAAGCVINDFADRKVDGHVKRTEQRPLISGKVSSREALALFAVLVGLSFVLVLFTNATTIWLSFGGLALAACYPFMKRYTYYPQVVLGAAFSWGMPMAFTAETGDLP-AAAWLLYIANLLWTVGYDTYYAMVDRDDDLKIGVKSTAVLFGDADR 218          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PHOLL (4-hydroxybenzoate octaprenyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            AY +L R++KPIG  LL WP  W++ MA      PD  ++              C +ND  DR  D  VERT+ RP+ SG ++                      N  +  L A  L L + YP +KRF+ +PQ  LG  + W   +G+AAV  SL L   + +++  +FW+++YDT YA  D+ DDLK+GVKSTA+ FG   K
Sbjct:   12 AYCRLMRINKPIGALLLLWPTFWALWMAGKG--IPDMHILLVFTAGVFLMRAAGCAINDFADRKFDGYVERTKTRPLPSGAISEKESKILFVVLALISFGLVLTLNKMAIWLSAVGLALAWLYPFVKRFSHFPQFVLGAAYGWAIPMGFAAVSESLPLEC-WLLFLVNIFWSVIYDTQYAMVDRNDDLKIGVKSTAILFGRFDK 212          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NEIMF (4-hydroxybenzoate octaprenyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L L  +   Y +L R DKPIGT LL WP  W++ +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + ++   +L L  +YP  KRF   PQ YLGL F++G  + +AAV  S+ +   + ++ + V WTL YDT+YA  DKEDDLK+G+K++A+ FG
Sbjct:    9 LRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIPMAFAAVGNSVPVEA-WILFTANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFG 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NEIM0 (4-hydroxybenzoate octaprenyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=ubiA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32
Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L L  +   Y +L R DKPIGT LL WP  W++ +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + ++   +L L  +YP  KRF   PQ YLGL F++G  + +AAV  S+ +   + ++ + V WTL YDT+YA  DKEDDLK+G+K++A+ FG
Sbjct:    9 LRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIPMAFAAVGNSVPVEA-WILFTANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFG 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NEIG2 (4-hydroxybenzoate octaprenyltransferase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.964e-32
Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L L  +   Y +L R DKPIGT LL WP  W++ +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + ++   +L L  +YP  KRF   PQ YLGL F++G  + +AAV  S+ +   + ++ + V WTL YDT+YA  DKEDDLK+G+K++A+ FG
Sbjct:    9 LRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGLAFSFGIPMAFAAVGNSVPVEA-WILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFG 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_AERS4 (4-hydroxybenzoate octaprenyltransferase OS=Aeromonas salmonicida (strain A449) GN=ubiA PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.964e-32
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 1
Query:  250 IDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            ++L    +  AY +LAR+DKPIGT LL WP +W++ +AA  G  PD   +              C +ND  DR+ D  V+RT  RP+  G + P                     N+ +  L  ++LLL   YP MKR+   PQ  LG+ F+W   + +AA   +L L V + ++++ + WT+ YDT YA  D++DDLK+G+KS+A+ FG   K
Sbjct:    1 MNLLTKERGLAYVQLARIDKPIGTLLLLWPTLWALWLAA--GGLPDLWTLLVFVVGVFLMRSAGCVINDYADRNFDGHVKRTAGRPLPMGKVKPREVLALFAVLALISFALVLTMNSLTIALSFAALLLAVCYPFMKRYIPIPQLVLGMAFSWSIPMAYAAQANALPL-VAWLVFLANLLWTIAYDTQYAMVDRDDDLKLGLKSSAILFGRHDK 211          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_NITOC4.669e-3236.454-hydroxybenzoate octaprenyltransferase OS=Nitroso... [more]
UBIA_NEIMB4.669e-3236.064-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_RALSO6.098e-3236.104-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]
UBIA_PSESM6.098e-3234.764-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_PSE146.098e-3235.244-hydroxybenzoate octaprenyltransferase OS=Pseudom... [more]
UBIA_PHOLL6.098e-3236.274-hydroxybenzoate octaprenyltransferase OS=Photorh... [more]
UBIA_NEIMF6.098e-3236.064-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_NEIM06.098e-3236.064-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_NEIG27.964e-3236.064-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_AERS47.964e-3235.054-hydroxybenzoate octaprenyltransferase OS=Aeromon... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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