FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEFN (4-hydroxybenzoate octaprenyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 75/221 (33.94%), Postives = 116/221 (52.49%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            L  + RAYA+L R+D+PIGT LL WPC+ ++ +AA     PD K++              C +ND  DR +D  VERT +RP+ SG ++                      N     L    ++L   YP MKR T  PQ +LG+ ++W   + +AA  G + +   + ++++   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F +A +
Sbjct:    3 LQDKLRAYARLMRIDRPIGTLLLLWPCLMALVLAAQG--LPDIKVLLIFIVGVVIMRANGCIINDFADRKLDAHVERTSMRPLVSGEVSVKEALTLFTLLGLAAFCLVLWLNPLVVQLSVVGIILTVMYPFMKRVTNMPQMFLGIVWSWSIPMAYAAQLGEVPVEAWW-LFMANWCWTVAYDTMYAIVDRDDDLKVGIKSTAILFGRFDRQIIGVFQLAAL 220          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEDO (4-hydroxybenzoate octaprenyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ubiA PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 72/209 (34.45%), Postives = 111/209 (53.11%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGF 909
            YA+L+R+D+PIGT LL WPC+ ++  AA     PD K++              C +ND  DR++D  VERT+ RP+ASG ++                      N     L    ++L   YP MKR T  PQ +LG+ ++W   + +AA  G + +   + ++ +   WT+ YDT+YA  D++DDLKVG+KS+A+ FG   ++W   F
Sbjct:   16 YAQLSRIDRPIGTLLLLWPCLMALLFAAKG--MPDIKVLLIFILGVVIMRACGCIINDYADRNLDAHVERTKQRPLASGAISSKEALSLFALLGLLAFALVLLLNPLVVKLSVVGIVLTIMYPFMKRVTNMPQMFLGIVWSWSIPMAYAAQLGEVPVEAWW-LFAANWCWTVAYDTMYAMIDRDDDLKVGIKSSAILFGRFDRQWIAVF 221          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ACTPJ (4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 74/199 (37.19%), Postives = 105/199 (52.76%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AYA+L R DKPIGT LL +P +W++  AA  G  P   ++              C +ND  DR ID  V+RT  RP+A+G +T                      N ++ +L   ++ L   YP MKRFT  PQ  LG+ F W   + + AV  SL L   + ++ + +FWT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   16 AYAQLMRFDKPIGTLLLLYPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHIDGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPFMKRFTHLPQVVLGMAFGWAIPMAYGAVSESLPLEC-WLLFFANIFWTVAYDTQYAMVDRDDDLRIGVKSTAILF 211          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANCP (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. campestris GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 76/205 (37.07%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P +   Y KL R D+PIG+ LL WP  W++ +AA  G  P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +  L    L L  SYP +KR T  PQ YLG+ F WG  +G+AAV+GS+ L + + +Y + + W   YDT YA  D+EDDL++G KSTA+ FG
Sbjct:   18 PERLGQYWKLVRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLSLNWLTVALSVPGLFLAASYPYLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSVPL-LAWLLYAANILWATAYDTWYAMVDREDDLRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANCB (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 76/205 (37.07%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P +   Y KL R D+PIG+ LL WP  W++ +AA  G  P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +  L    L L  SYP +KR T  PQ YLG+ F WG  +G+AAV+GS+ L + + +Y + + W   YDT YA  D+EDDL++G KSTA+ FG
Sbjct:   18 PERLGQYWKLVRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLSLNWLTVALSVPGLFLAASYPYLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSVPL-LAWLLYAANILWATAYDTWYAMVDREDDLRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XANC8 (4-hydroxybenzoate octaprenyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 76/205 (37.07%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            P +   Y KL R D+PIG+ LL WP  W++ +AA  G  P    +              C +ND  DR +D  VERT+ RP+A+G ++                      N  +  L    L L  SYP +KR T  PQ YLG+ F WG  +G+AAV+GS+ L + + +Y + + W   YDT YA  D+EDDL++G KSTA+ FG
Sbjct:   18 PERLGQYWKLVRGDRPIGSLLLLWPTWWALWLAA--GGLPPLWTLFVFTAGVWLTRSAGCVINDYADRWLDPHVERTKSRPLATGAVSGREALWVFVVLMLVAFALVLSLNWLTVALSVPGLFLAASYPYLKRHTHLPQVYLGMAFGWGIPMGFAAVQGSVPL-LAWLLYAANILWATAYDTWYAMVDREDDLRMGSKSTAILFG 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PASMU (4-hydroxybenzoate octaprenyltransferase OS=Pasteurella multocida GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 71/199 (35.68%), Postives = 105/199 (52.76%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AYA+L R DKPIGT LL WP +W++ ++      PD  ++              C +ND  DR ID  V+RT  RP+A+G  TP                     N ++ +L   ++ L F YP MKR+T  PQ +LG+ F W   + + A   +L L   + ++ + + WT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   10 AYAQLMRFDKPIGTLLLLWPTLWALFLSVKG--MPDLSILSIFVLGVIFMRAAGCVINDYADRHIDGAVKRTSKRPLATGAATPEEAKWLFVLLVFCSFILVLFLNTYAIVLSFIAVFLAFIYPFMKRYTHLPQLFLGMAFGWSIPMAYGASIEALPLEC-WLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILF 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NITEC (4-hydroxybenzoate octaprenyltransferase OS=Nitrosomonas eutropha (strain C91) GN=ubiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            AYA+L RLDKPIG  LL WP +W + +AA     PD  ++              C +ND  DR ID  V RTR RP+A+G+++                      N  + +L   +LLL  SYP  KRF   PQAYLG+ F++G  + +AA  G++   + + + ++ +FW + YDT YA  D  DDLK+G+K++A+ FG
Sbjct:    9 AYARLTRLDKPIGILLLLWPTLWGLWLAADG--MPDPMILVIFVLGTILMRSAGCAINDFADRKIDPHVSRTRNRPLATGIISSREALLVAAGLSLCAFLLILPLNLLTILLSVPALLLAISYPFTKRFFAMPQAYLGIAFSFGIPMAFAAQTGTVP-PLAWLLVLANLFWVIAYDTEYALVDLADDLKIGIKTSAITFG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_PHOPR (4-hydroxybenzoate octaprenyltransferase OS=Photobacterium profundum GN=ubiA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.774e-31
Identity = 71/207 (34.30%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            +A+A+ +LAR D+PIG+ LL WP +W++ +AA     P+  ++              C +ND  DR+ D  V+RT  RP+ SG ++                      N  + +L    L+L  +YP MKR+T  PQ  LG+ F W   + +AA  G L + V + ++ + + WT+ YDT YA  D++DDLKVG+KS A+ FG   K
Sbjct:    6 KAKAFCQLARFDRPIGSLLLLWPTLWALFLAADG--LPNMHVLVVFVLGVVFMRAAGCVINDFADRNFDGHVKRTAKRPMPSGKISEREALGLFGLLVLVSFVLVLTMNTLTIMLSVVGLVLAAAYPFMKRYTHLPQLVLGMAFGWSIPMAYAAQAGELPV-VAWLLFTANILWTIAYDTQYAMVDRDDDLKVGIKSAAILFGRFDK 209          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEPW (4-hydroxybenzoate octaprenyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 73/214 (34.11%), Postives = 112/214 (52.34%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            Y +L+R+D+PIGT LL WPC+ ++  AA  G  PD K++              C +ND  DR++D  VERT+ RP+ASG ++                      N     L    ++L   YP  KR+T  PQ +LG  ++W   + +AA  G++  A  + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   ++    F  A +
Sbjct:   10 YLRLSRMDRPIGTLLLMWPCLMALWFAA--GGMPDIKVLVIFVIGVVVMRACGCVINDYADRNLDAHVERTQSRPLASGEISSKEALIVFLVMALFAFCLVLLLNPLVVKLSVVGIILTIIYPFTKRYTNMPQMFLGTVWSWSIPMAYAAQTGTVP-AEAWWLFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIAAFQFAAL 220          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_SHEFN1.040e-3133.944-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_SHEDO1.040e-3134.454-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_ACTPJ1.040e-3137.194-hydroxybenzoate octaprenyltransferase OS=Actinob... [more]
UBIA_XANCP1.358e-3137.074-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_XANCB1.358e-3137.074-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_XANC81.358e-3137.074-hydroxybenzoate octaprenyltransferase OS=Xanthom... [more]
UBIA_PASMU1.358e-3135.684-hydroxybenzoate octaprenyltransferase OS=Pasteur... [more]
UBIA_NITEC1.358e-3137.004-hydroxybenzoate octaprenyltransferase OS=Nitroso... [more]
UBIA_PHOPR1.774e-3134.304-hydroxybenzoate octaprenyltransferase OS=Photoba... [more]
UBIA_SHEPW2.317e-3134.114-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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