FC877882

Overview
NameFC877882
Unique NameFC877882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6288 contig Ccv1_Contig6288:136..1060. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_NEIG1 (4-hydroxybenzoate octaprenyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=ubiA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 74/208 (35.58%), Postives = 107/208 (51.44%), Query Frame = 1
Query:  256 LYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L L  +   Y +L R DKPIGT LL WP  W++ +A+     PD  ++              C +ND  DRD D  VERT+ RP A G +                       N+ + ++   +L L  +YP  KRF   PQ YLG  F++G  + +AAV  S+ +   + ++ + V WTL YDT+YA  DKEDDLK+G+K++A+ FG
Sbjct:    9 LRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLASDG--IPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEALLLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGFAFSFGIPMAFAAVGNSVPVEA-WILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFG 213          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_JANMA (4-hydroxybenzoate octaprenyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=ubiA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 73/199 (36.68%), Postives = 110/199 (55.28%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            Y +L RL KPIG  LL WP +W++ MA+     PD+ ++              C VND  DRD D  V+RT  RPI SG + P                     N  ++ L  +++++  +YP  KRF   PQAYLG+ F +G  +G+AAV+ ++  A  + + ++ VFW++ YDT YA  D+EDDLK+G+K++A+ FG
Sbjct:    7 YFRLIRLHKPIGILLLLWPTLWALWMASDGK--PDWTLVAIFTLGTVLMRSAGCAVNDYADRDFDKHVQRTVDRPITSGKIKPYEALLVALVLTLLAFALIWPLNTLTKQLSIAAVIIAATYPYFKRFFAIPQAYLGIAFGFGIPMGFAAVQNTVPAAAWW-LLVANVFWSVAYDTEYAMVDREDDLKLGMKTSAITFG 202          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_POLSQ (4-hydroxybenzoate octaprenyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 71/206 (34.47%), Postives = 110/206 (53.40%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            L  +  +YA L RLDKPIGT LL WP +W++ +A+     P  +M+              C +ND  DRD D  V+RT+ RP+ SG ++                      N F++ L   +LL+ F YP  KRF   PQA LG+ F +G  + +AAV   + L   + +++  +FW + YDT YA  D++DDL++G++++A+ FG
Sbjct:    3 LKERFTSYAYLIRLDKPIGTLLLLWPTLWALWLAS--SGTPSLQMLMIFIAGTFLMRSAGCAINDYADRDFDRHVQRTKHRPVTSGKISGKEAVVVAGVLALIAFLLIQPLNIFTKELSVLALLVAFIYPFTKRFLAIPQAVLGIAFGFGIPMAYAAVLDFIPLEA-WVLFVGNIFWAIAYDTAYAMVDRDDDLRLGLRTSAITFG 205          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_CHRSD (4-hydroxybenzoate octaprenyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 73/203 (35.96%), Postives = 109/203 (53.69%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSK 891
            + +L RLD+PIGTWLL WP +W++ +AA     P+   +              C VND  DR  D  V+RTR RP+A+G +T                      N  + +L  ++L L  +YP MKR+T +PQ  LG  F+WG  + + A++  + L   + +  + V WT+ YDT YA  D++DDLKVG+KSTA+ FG + +
Sbjct:   20 FLRLTRLDRPIGTWLLMWPTLWALWLAAEG--IPERGTLLIFVIGVYVMRAAGCVVNDYADRHFDGHVKRTRDRPLATGRITEKEAKVLFAGLVIIAFGLVCLTNLPTVLLSFAALALAATYPFMKRYTHFPQVVLGAAFSWGIPMAFMAIQRQVPLEA-WLLLAANVAWTVAYDTEYAMVDRDDDLKVGIKSTAVLFGRADR 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ACTP7 (4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AYA+L R DKPIGT LL  P +W++  AA  G  P   ++              C +ND  DR ID  V+RT  RP+A+G +T                      N ++ +L   ++ L   YP MKRFT  PQ  LG+ F W   + + AV  SL L   + ++ + +FWT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   16 AYAQLMRFDKPIGTLLLLHPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHIDGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPFMKRFTHLPQVVLGMAFGWAIPMAYGAVSESLPLEC-WLLFFANIFWTVAYDTQYAMVDRDDDLRIGVKSTAILF 211          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_ACTP2 (4-hydroxybenzoate octaprenyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRF 876
            AYA+L R DKPIGT LL  P +W++  AA  G  P   ++              C +ND  DR ID  V+RT  RP+A+G +T                      N ++ +L   ++ L   YP MKRFT  PQ  LG+ F W   + + AV  SL L   + ++ + +FWT+ YDT YA  D++DDL++GVKSTA+ F
Sbjct:   16 AYAQLMRFDKPIGTLLLLHPTLWALFAAA--GGMPPLSVLVIFVLGVIVMRAAGCVINDYADRHIDGEVKRTSQRPLATGRVTTTEAKILFVLLLCIAFVLDLLLNRYTFLLSFVAVALAIIYPFMKRFTHLPQVVLGMAFGWAIPMAYGAVSESLPLEC-WLLFFANIFWTVAYDTQYAMVDRDDDLRIGVKSTAILF 211          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XYLFT (4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 69/200 (34.50%), Postives = 105/200 (52.50%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGD 882
            Y KLAR D+P+G  LL WP  W++ +AA     P +  +              C +ND  DR +D  VERT  RP+ +G ++P                     N  + +L  + L L  +YP +KR+T  PQ YLG+ F WG  + +AA++G +   + + +Y++ + WT  YDT YA  D++DD+K+G KSTA+ F D
Sbjct:   23 YWKLARGDRPVGFLLLLWPTWWALWLAADG--VPPWWTLCVFTTGIWLTRSAGCVINDYTDRWLDPHVERTCTRPLVTGTVSPRNALLMFGTLMLIAFGLVLTMNRLTVLLSVAGLFLAMTYPYLKRYTHLPQVYLGIAFGWGIPMAFAAIQGKVP-TLAWLLYVANILWTTAYDTWYAMVDRDDDIKMGAKSTAILFAD 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_XYLF2 (4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa (strain M23) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 69/200 (34.50%), Postives = 105/200 (52.50%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGD 882
            Y KLAR D+P+G  LL WP  W++ +AA     P +  +              C +ND  DR +D  VERT  RP+ +G ++P                     N  + +L  + L L  +YP +KR+T  PQ YLG+ F WG  + +AA++G +   + + +Y++ + WT  YDT YA  D++DD+K+G KSTA+ F D
Sbjct:   23 YWKLARGDRPVGFLLLLWPTWWALWLAADG--VPPWWTLCVFTTGIWLTRSAGCVINDYTDRWLDPHVERTCTRPLVTGTVSPRNALLMFGTLMLIAFGLVLTMNRLTVLLSVAGLFLAMTYPYLKRYTHLPQVYLGIAFGWGIPMAFAAIQGKVP-TLAWLLYVANILWTTAYDTWYAMVDRDDDIKMGAKSTAILFAD 219          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_SHEAM (4-hydroxybenzoate octaprenyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 75/215 (34.88%), Postives = 112/215 (52.09%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSSKEWTTGFGIACI 924
            AY +L RLD+PIGT LL WPC+ ++ +AA     PD +++              C +ND  DR +D+ V RTR RP+ASG +T                      N     L    ++L   YP  KR+T  PQ +LG+ ++W   + +AA  G +  A  + ++ +   WT+ YDT+YA  D++DDLKVG+KSTA+ FG   +E    F +A +
Sbjct:   10 AYYRLMRLDRPIGTMLLLWPCLMALLLAADG--MPDLRVLIIFIIGVVVMRACGCIINDYADRKLDSHVARTRSRPLASGEVTVAEALTLFVVLGLFAFSLVLLLNPLVVQLSVVGIILTIIYPFTKRWTNMPQMFLGVVWSWSIPMAYAAQTGEVP-ASAWWLFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGRFDREIIGAFQLAAL 221          
BLAST of FC877882 vs. ExPASy Swiss-Prot
Match: UBIA_RALEJ (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia eutropha (strain JMP134) GN=ubiA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVYDTIYAHQDKEDDLKVGVKSTALRFG 879
            YA+L R+DKPIGT LL WP +W++ MAA  G  P   +               C +ND  DRD D  V+RT+ RP+ +G +                       N+ ++ L   + ++  +YP  KRF   PQAYLG+ F +G  + +AAV+  + L V + M ++ VFW + YDT YA  D++DDL +G+K++A+ FG
Sbjct:    8 YARLVRIDKPIGTLLLLWPTLWALWMAA--GGPPALSVFCIFFAGTFLMRSAGCAINDYADRDFDKHVKRTKERPLTAGKIAAWEAVLIAAVLALIAFALILPLNSLTKWLAVVAAVVAGTYPFFKRFFAIPQAYLGIAFGFGIPMAFAAVQDQVPL-VAWVMLLANVFWAVAYDTAYAMVDRDDDLLIGIKTSAITFG 203          
The following BLAST results are available for this feature:
BLAST of FC877882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_NEIG12.317e-3135.584-hydroxybenzoate octaprenyltransferase OS=Neisser... [more]
UBIA_JANMA2.317e-3136.684-hydroxybenzoate octaprenyltransferase OS=Janthin... [more]
UBIA_POLSQ3.026e-3134.474-hydroxybenzoate octaprenyltransferase OS=Polynuc... [more]
UBIA_CHRSD3.026e-3135.964-hydroxybenzoate octaprenyltransferase OS=Chromoh... [more]
UBIA_ACTP73.026e-3137.194-hydroxybenzoate octaprenyltransferase OS=Actinob... [more]
UBIA_ACTP23.026e-3137.194-hydroxybenzoate octaprenyltransferase OS=Actinob... [more]
UBIA_XYLFT3.952e-3134.504-hydroxybenzoate octaprenyltransferase OS=Xylella... [more]
UBIA_XYLF23.952e-3134.504-hydroxybenzoate octaprenyltransferase OS=Xylella... [more]
UBIA_SHEAM3.952e-3134.884-hydroxybenzoate octaprenyltransferase OS=Shewane... [more]
UBIA_RALEJ3.952e-3135.684-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15CA07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CA07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877882 ID=FC877882; Name=FC877882; organism=Citrus clementina; type=EST; length=925bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGCATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATGATACAATATATGCACATCAGGATAAAGAAGATGATTTGAAAGTTG
GTGTAAAATCTACTGCTTTGAGATTTGGGGATTCTTCTAAGGAATGGACT
ACTGGGTTCGGAATTGCATGCATAA
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