FC877895

Overview
NameFC877895
Unique NameFC877895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length884
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:17..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN7_ORYSJ (Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.111e-35
Identity = 67/139 (48.20%), Postives = 96/139 (69.06%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL+ ++ +F+ Q+SG+L +N +++WR  S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW+++EYGD ++   +L  A +++KW TDY I AH K N L  +VG  D DH CW+RPE M   R   +V+
Sbjct:   37 YEDALRKSLLYFEAQRSGRLPHNQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSMIEYGDDVEAAGELGHALEAIKWGTDYFIKAHTKPNELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVD 175          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN11_ARATH (Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.223e-35
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGR 863
            Y EAL  ++ +F+ Q+SG+L  N +++WR  S L DG + G+DL  G +DAGDH+KFG PMAFT T+LSW+++EYGD +    +L  A +++KW TDY I AH   NVL  +VG  D DH CW+RPE M   R
Sbjct:   40 YGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSR 172          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN15_ARATH (Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44570 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.229e-34
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL  ++ +F+ Q+SGKL ++ ++ WRGDSAL+DG D  +DLT G YDAGD+MKFGFP+AFT T+L+W+ +E   Q+    +      +L+W TDYLI AHP+ NVL  QVG  + DH CW RPE M   RP  +++
Sbjct:   34 YGEALTKSLLYFEAQRSGKLPLDQRVIWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFTTTMLAWSSVEMESQLKAHQEHGNTLAALRWATDYLIKAHPEPNVLYGQVGDANLDHACWMRPEDMTTPRPSYRID 172          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN1_ORYSJ (Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.737e-34
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGR 863
            Y  AL  ++ +F+ Q+SG L  N +I+WR +S L DG+  G+DL  G YDAGD++KFGFPMAFT T+++W++LEYG QM    +L  A D+++W  DY + AHP  NVL  +VG  D DH CW+RPE M   R
Sbjct:   42 YRMALSKSILYFEAQRSGVLPGNQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGFPMAFTVTMMAWSVLEYGKQMAAAGELGHAMDAVRWGADYFVKAHPAPNVLYGEVGDGDSDHVCWQRPEDMTTSR 174          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN16_ORYSJ (Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.737e-34
Identity = 67/139 (48.20%), Postives = 93/139 (66.91%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL+ ++ +F+ Q+SG+L +  +++WR  S L DG + G+DL  G YDAGDH+KFG PMAFT T+LSW++LEYG  +    +L  A D++KW TDY I AH K + L  +VG  D DH CW+RPE M   R   +V+
Sbjct:   31 YEEALRKSLLYFEAQRSGRLPHGQRVAWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLLEYGADVAAAGELAHALDAIKWGTDYFIKAHTKPHELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVD 169          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.963e-34
Identity = 67/133 (50.38%), Postives = 89/133 (66.92%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGR 863
            Y +AL  ++ FF+ Q+SG L  N ++SWR  S L DG+  G+DL  G YDAGD++KFG PMAFT T + W+I+EYG Q++   +L  A D++KW TDY I AHP+ NVL  +VG    DH CW+RPE M   R
Sbjct:   27 YKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWGTDYFIKAHPEPNVLYGEVGDGKSDHYCWQRPEEMTTDR 159          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN6_ARATH (Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.358e-33
Identity = 63/139 (45.32%), Postives = 95/139 (68.35%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SG L  N +++WR  S L DG+  G++L  G YDAGD++KFG PMAFT T+++W+++EYG+Q+    +L  + D++KW TDY I AHP+ NVL  +VG  + DH CW+RPE M   R   +++
Sbjct:   26 YGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRID 164          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN2_ORYSJ (Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.358e-33
Identity = 63/133 (47.37%), Postives = 91/133 (68.42%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGR 863
            Y  AL  ++ +F+ Q+SG L  + +I+WR +S L DG+  G+DL  G YDAGD++KFG PMAFT T+++W+++EYG++M    +L  A +++KW TDY   AHP+ NVL  +VG  D DH CW+RPE M   R
Sbjct:   41 YGMALSKSILYFEAQRSGVLPGSQRIAWRANSGLADGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGEEMAAAGELGHAVEAIKWGTDYFAKAHPEPNVLYAEVGDGDSDHNCWQRPEDMTTSR 173          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN23_ORYSJ (Endoglucanase 23 OS=Oryza sativa subsp. japonica GN=GLU12 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.774e-33
Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL--VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SG+L     + +WRGDSA+ DG   G+DL  G YDAGD++KFGFPMAFTAT+L+W ++E+GD M   ++   A D+++W TDYL+       V+ +QVG P KDH CWERPE M   R +  ++
Sbjct:   42 YGDALAKSILFFEGQRSGRLPAAGQRAAWRGDSAVSDGGAAGVDLEGGYYDAGDNVKFGFPMAFTATMLAWGVVEFGDAMPPAERAH-AADAVRWATDYLLKTISHPGVIFIQVGDPTKDHGCWERPEDMDTARTVYNIS 180          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN1_PERAE (Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.317e-33
Identity = 70/141 (49.65%), Postives = 99/141 (70.21%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAH-PKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVNT 884
            Y++AL+ ++ FF+ Q+SGKL  N +++WRGDS L DG    +DL  G YDAGD++KFG PMAFT T+L+W I+E+G  M   +Q++ A+ +L+W TDYL+ A     N L VQVG P+ DH+CWERPE M   R + +V+T
Sbjct:   30 YSDALEKSILFFEGQRSGKLPTNQRLTWRGDSGLSDGSSYHVDLVGGYYDAGDNLKFGLPMAFTTTMLAWGIIEFGCLMP--EQVENARAALRWSTDYLLKASTATSNSLYVQVGEPNADHRCWERPEDMDTPRNVYKVST 168          
The following BLAST results are available for this feature:
BLAST of FC877895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN7_ORYSJ1.111e-3548.20Endoglucanase 7 OS=Oryza sativa subsp. japonica GN... [more]
GUN11_ARATH4.223e-3549.62Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32... [more]
GUN15_ARATH1.229e-3449.64Endoglucanase 15 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN1_ORYSJ2.737e-3449.62Endoglucanase 1 OS=Oryza sativa subsp. japonica GN... [more]
GUN16_ORYSJ2.737e-3448.20Endoglucanase 16 OS=Oryza sativa subsp. japonica G... [more]
GUN19_ARATH7.963e-3450.38Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11... [more]
GUN6_ARATH1.358e-3345.32Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g643... [more]
GUN2_ORYSJ1.358e-3347.37Endoglucanase 2 OS=Oryza sativa subsp. japonica GN... [more]
GUN23_ORYSJ1.774e-3347.14Endoglucanase 23 OS=Oryza sativa subsp. japonica G... [more]
GUN1_PERAE2.317e-3349.65Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CE06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877895 ID=FC877895; Name=FC877895; organism=Citrus clementina; type=EST; length=884bp
AAAATAAAATAACGAATAAACCCGCGTGACTGACCTCTGTCGGTGATCAA
AGAAATTAAAGAAAATTGACGATCTGATTTGTCCCAGACCCAGCTGCTTC
AATTGTATTGTATTAGAGAATTTGCAAAACTGATTCAGCAGCCAAATTAA
GCTTCTTACCACTCACATTTCACCCACTAGAGAGAAATACGGTGCTGCGT
TTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCACCCA
ATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATTGTG
TTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTCTTG
GTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTATTAA
AAAGAAAACAAGTCACTCTGATAAGCCGGCTCCAGTTCCCGGTCCCCCCG
GCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAGTTC
TTCGACGTACAAAAATCGGGAAAGTTGGTGAATAATAAGATATCATGGAG
AGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCACAA
AAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATGGCT
TTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCAGAT
GGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGATCA
CTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTTCAG
GTGGGGCATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAGCAT
GGCTGAAGGGAGACCACTCACTCAGGTCAACACA
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