FC877895

Overview
NameFC877895
Unique NameFC877895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length884
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:17..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.741e-33
Identity = 68/139 (48.92%), Postives = 98/139 (70.50%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SGKL +N ++SWR DS L DG  + +DL  G YDAGD++KFGFPMAFT T+LSW+++E+G  M    +LQ A+ +++W TDYL+ A  + + + VQVG  +KDH CWERPE M   R + +V+
Sbjct:   53 YKDALTKSILFFEGQRSGKLPSNQRMSWRRDSGLSDGSALHVDLVGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGGLMK--SELQNAKIAIRWATDYLLKATSQPDTIYVQVGDANKDHSCWERPEDMDTVRSVFKVD 189          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN1_ARATH (Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.150e-32
Identity = 66/139 (47.48%), Postives = 96/139 (69.06%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SGKL  N +++WR +S L DG  + +DL  G YDAGD+MKFGFPMAFT T+LSW+++E+G  M    +L  A+D+++W TD+L+ A    + + VQVG P+ DH CWERPE M   R + +V+
Sbjct:   44 YKDALSKSILFFEGQRSGKLPPNQRMTWRSNSGLSDGSALNVDLVGGYYDAGDNMKFGFPMAFTTTMLSWSLIEFGGLMK--SELPNAKDAIRWATDFLLKATSHPDTIYVQVGDPNMDHACWERPEDMDTPRSVFKVD 180          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.346e-32
Identity = 64/141 (45.39%), Postives = 95/141 (67.38%), Query Frame = 3
Query:  465 KYAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVNT 884
            +Y +AL  ++ FF+ Q+SGKL  N ++ WR DSAL DG    ++L  G YDAGD++KF +PM+FT T+LSWA +EY +++  V+QL   + ++KW TD+++ AH   N+L  QVG  + DH CWERPE M   R L  +++
Sbjct:   23 EYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLANVNLIGGYYDAGDNVKFVWPMSFTTTLLSWAAIEYQNEISSVNQLGYLRSTIKWGTDFILRAHTSPNMLYTQVGDGNSDHSCWERPEDMDTSRTLYSISS 163          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.370e-32
Identity = 64/138 (46.38%), Postives = 92/138 (66.67%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQV 878
            Y +AL  A+ FF+ Q+SG+L  N + +WRGDSAL DGR+  ++LT G YDAGD++KFG+PMAFT T+L W+ +EYG  +    +L   + +++W  D+L+ AH     L  QVG  + DH+CWERPE M   R L ++
Sbjct:   41 YGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVNLTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWGADFLLRAHASPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKI 178          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN16_ARATH (Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.707e-32
Identity = 61/139 (43.88%), Postives = 96/139 (69.06%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ F + Q+SGKL  NN++ WRGDSAL DG+ + +DL+ G YDAGD++K+G PMAFT T L+W+ + Y  ++    +L+ A+ +++W TDY +    ++N L VQVG P+ DH+CW RPE+M   R + +++
Sbjct:   35 YKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSGGYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLKCASRKNRLYVQVGDPNADHQCWARPENMKTPRTVLEIS 173          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUNZ_CLOSR (Endoglucanase Z OS=Clostridium stercorarium GN=celZ PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.453e-32
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNNKI-SWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL+ A+ F++ Q+SGKL  NK  +WRGDS L DG D+GLDLT G YDAGDH+KF  PMA++ T+L+WA  E  + ++   Q+    D++KW++DYLI  HP  NV   QVG    DH  W   E M   RP  +V+
Sbjct:   32 YGEALQKAIMFYEFQRSGKLPENKRDNWRGDSGLNDGADVGLDLTGGWYDAGDHVKFNLPMAYSQTMLAWAAYEAEEALERSGQMGYLLDAIKWVSDYLIKCHPSPNVFYYQVGDGHLDHSWWGPAEVMQMDRPAYKVD 170          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.453e-32
Identity = 66/133 (49.62%), Postives = 83/133 (62.41%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGR 863
            Y  AL     FF+ Q+SGKL    ++ WRG S LKDG   G+ L  G YDAGDH+KFG PMAF  T+LSWA ++   ++   +Q+Q    S++W TDY I AHP+ NVL  QVG  + DH CWERPE M   R
Sbjct:   31 YGSALDKTFLFFEAQRSGKLPAAQRVKWRGPSGLKDGLAQGVSLEGGYYDAGDHVKFGLPMAFAVTMLSWAAVDNRKELSSSNQMQQTLWSIRWGTDYFIKAHPQPNVLWGQVGDGESDHYCWERPEDMTTSR 163          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN4_ARATH (Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g23210 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.453e-32
Identity = 66/139 (47.48%), Postives = 97/139 (69.78%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL+ ++ FF+ Q+SGKL  + ++ WR DSAL+DG   G+DLT G YDAGD++KFGFPMAFT T++SW+++++G  M    +L+ A  ++KW TDYL+ A    +V+ VQVG    DH CWERPE M   R + +++
Sbjct:   29 YRDALRKSILFFEGQRSGKLPPDQRLKWRRDSALRDGSSAGVDLTGGYYDAGDNVKFGFPMAFTTTMMSWSVIDFGKTMG--PELENAVKAIKWGTDYLMKATQIPDVVFVQVGDAYSDHNCWERPEDMDTLRTVYKID 165          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.453e-32
Identity = 65/139 (46.76%), Postives = 98/139 (70.50%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y +AL  ++ FF+ Q+SGKL  + ++SWRGDS L DG  + +DL  G YDAGD+MKFGFP+AF+ T+L+W+++E+G  M    +LQ A+D+++W +DYL+ A    + + VQVG  ++DH CWERPE M   R + +V+
Sbjct:   36 YRDALTKSILFFEGQRSGKLPPSQRVSWRGDSGLSDGSSIKVDLVGGYYDAGDNMKFGFPLAFSMTMLAWSVVEFGGLMK--GELQHARDAVRWGSDYLLKATAHPDTVYVQVGDANRDHACWERPEDMDTPRTVYKVD 172          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUNA_BACPU (Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.735e-32
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y E L+ +M F++ Q+SG+L  +N+++WRGDS LKDG+D+G DLT G YDAGDH+KFG PMA++A VL+W + EY +  +  + L    D +KW TDY + AH   N    QVG  + DH  W   E M   RP  +++
Sbjct:   49 YVEVLQKSMLFYEAQRSGRLPESNRLNWRGDSGLKDGKDVGHDLTGGWYDAGDHVKFGLPMAYSAAVLAWTVYEYREAYEEAELLDEILDQIKWATDYFLKAHTGPNEFWAQVGDGNADHAWWGPAEVMPMNRPAFKID 187          
The following BLAST results are available for this feature:
BLAST of FC877895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN17_ARATH6.741e-3348.92Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]
GUN1_ARATH1.150e-3247.48Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE... [more]
GUN20_ARATH3.346e-3245.39Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUN20_ORYSJ4.370e-3246.38Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]
GUN16_ARATH5.707e-3243.88Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43... [more]
GUNZ_CLOSR7.453e-3248.20Endoglucanase Z OS=Clostridium stercorarium GN=cel... [more]
GUN5_ARATH7.453e-3249.62Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489... [more]
GUN4_ARATH7.453e-3247.48Endoglucanase 4 OS=Arabidopsis thaliana GN=At1g232... [more]
GUN3_ORYSJ7.453e-3246.76Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUNA_BACPU9.735e-3245.32Endoglucanase A OS=Bacillus pumilus GN=eglA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CE06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877895 ID=FC877895; Name=FC877895; organism=Citrus clementina; type=EST; length=884bp
AAAATAAAATAACGAATAAACCCGCGTGACTGACCTCTGTCGGTGATCAA
AGAAATTAAAGAAAATTGACGATCTGATTTGTCCCAGACCCAGCTGCTTC
AATTGTATTGTATTAGAGAATTTGCAAAACTGATTCAGCAGCCAAATTAA
GCTTCTTACCACTCACATTTCACCCACTAGAGAGAAATACGGTGCTGCGT
TTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCACCCA
ATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATTGTG
TTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTCTTG
GTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTATTAA
AAAGAAAACAAGTCACTCTGATAAGCCGGCTCCAGTTCCCGGTCCCCCCG
GCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAGTTC
TTCGACGTACAAAAATCGGGAAAGTTGGTGAATAATAAGATATCATGGAG
AGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCACAA
AAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATGGCT
TTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCAGAT
GGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGATCA
CTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTTCAG
GTGGGGCATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAGCAT
GGCTGAAGGGAGACCACTCACTCAGGTCAACACA
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