FC877895

Overview
NameFC877895
Unique NameFC877895
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length884
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11587 contig Ccv1_Contig11587:17..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN19_ORYSJ (Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.828e-28
Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQV 878
            YA+AL  ++ FF+ Q+SGKL   N++ WR DS L DG    +DL  G YDAGD++KFG PMAF+ T+L+W++L++G  M    +L  A+ +++W  DYL+ +A      L VQV  P++DH+CWERPE M   R + +V
Sbjct:   55 YADALAKSIIFFEGQRSGKLPPGNRMPWRADSGLTDGAQYNVDLVGGYYDAGDNVKFGLPMAFSTTMLAWSVLDFGKFMGA--ELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPEDMDTPRSVYRV 191          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUNG_CLOCE (Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.455e-27
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKL-VNNKISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLISAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y EAL+ ++ F++ Q+SG L  + + +WR DS +KDG D+G+DLT G YDAGDH+KF  PM++T+ +L+W++ E  D  D   Q +   D +KW  DY I  +P   V   QVG   KDH  W   E M   RP  +V+
Sbjct:   41 YGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVD 179          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.455e-27
Identity = 63/140 (45.00%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESMAEGRPLTQVN 881
            Y++AL  ++ FF+ Q+SG L N+ +++WR +S L DG    +DLT G YDAGD++KF FPMAFT T+L+W+++E+G+ M    +L+ +  +L+W ++YL+ S     N + VQVG P  DH CWERPE M   R    VN
Sbjct:   30 YSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNIDLTGGYYDAGDNVKFNFPMAFTTTMLAWSVIEFGEFMP-SSELRNSLVALRWSSNYLLKSVSQLPNRIFVQVGDPIADHNCWERPEDMDTPRTAYAVN 168          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN22_ARATH (Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38990 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26
Identity = 58/130 (44.62%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESM 851
            Y++AL  ++ FF+ Q+SG L    +++WR +SAL DG+++ +DL  G YDAGD++KF FPMAFT T+L+W+ +++G  M   D L+    +L+W ++YL+ +     N + VQVG P  DH+CWERPE M
Sbjct:   24 YSDALTKSILFFEGQRSGYLPREQRMTWRHNSALNDGKNLNVDLVGGYYDAGDNIKFHFPMAFTTTMLAWSAIDFGSYMSPAD-LRDNLVALRWGSNYLLKTVSQLPNRIFVQVGEPTPDHQCWERPEDM 152          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.042e-25
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVN-NKISWRGDSALKDGR-DMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVG-------HPDKDHKCWERPESMAEGRPL 869
            Y  AL  A+QFFD QKSGKL   NK+SWRGDS  KDG  D+   L  G YD G ++KF FPMAF+ T+LSW+++EY  +   +D+    +D LKW TDYL+    ++  + + +  QVG        PD D  CW++PE M+  RP+
Sbjct:  117 YTLALHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDGLPDVVGGLVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDYLLLTFNNSATRLDHIYTQVGGGLRDSESPD-DIYCWQKPEDMSYDRPV 262          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN23_ARATH (Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39000 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.322e-25
Identity = 58/130 (44.62%), Postives = 87/130 (66.92%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLVNN-KISWRGDSALKDGRDMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI-SAHPKENVLIVQVGHPDKDHKCWERPESM 851
            Y++AL+ ++ FF+ Q+SG+L    +++WR +SAL DG+++  DL  G YDAGD++KF FPMAFTAT+L+W+ +++G  M   D  +    ++KW TDYL+ +     N + V VG    DH CWERPE M
Sbjct:   26 YSDALRKSILFFEGQRSGRLPKQQRMAWRRNSALNDGKNLKTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSVDFGRYMSQHD-FRHNLVAVKWATDYLLKTVSQLPNRIFVHVGEVQPDHDCWERPEDM 154          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN25_ARATH (Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25
Identity = 64/155 (41.29%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGR----DMGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVGHPD--------KDHKCWERPESMAEGRPLTQVN 881
            Y  AL  A++FF+ QKSGKL  +N +SWRG+S L+DG+        DL  G YDAGD +KF FPMA+  T+LSW+++EY  + +   +L   ++ +KW TDY +    S     + L+ QVG  +         DH CW RPE M   RP+T  N
Sbjct:  109 YTIALHKALKFFNAQKSGKLPKHNNVSWRGNSGLQDGKGETGSFYKDLVGGYYDAGDAIKFNFPMAYAMTMLSWSVIEYSAKYEAAGELTHVKELIKWGTDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKRPVTTCN 263          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN12_ORYSJ (Endoglucanase 12 OS=Oryza sativa subsp. japonica GN=GLU3 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 65/150 (43.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:  465 KYAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRDMGL---DLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVG-------HPDKDHKCWERPESMAEGRPL 869
            +Y +AL  A+ FF+ QKSG+L  NN I WRG+S L DG D+      L  G YDAGD++KF FP+AF+ T+LSW+++EY  +   V +    ++ +KW TDYL+    S+    + +  QVG        PD DH CW RPE MA  RP+
Sbjct:  110 QYTDALHKALLFFNAQKSGRLPKNNGIKWRGNSGLSDGSDLTDVKGGLVGGYYDAGDNIKFHFPLAFSMTMLSWSVIEYSAKYKAVGEYDHVRELIKWGTDYLLLTFNSSASTIDKVYSQVGIAKINGTQPD-DHYCWNRPEDMAYPRPV 258          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN9_ORYSJ (Endoglucanase 9 OS=Oryza sativa subsp. japonica GN=GLU1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 60/152 (39.47%), Postives = 88/152 (57.89%), Query Frame = 3
Query:  468 YAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRD---MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVGH--------PDKDHKCWERPESMAEGRPLTQ 875
            +  AL+ A+ FF+ QKSGKL  NN + WRG+S +KDG     +G  L  G YDAGD +KF FP AF+ T+LSW+++EY  + + V +L   +D++KW  DY +    S     + +++QVG            DH CW RPE +   RP+ +
Sbjct:  112 FTVALRKALMFFNAQKSGKLPKNNNVHWRGNSCMKDGLSDPAVGRSLVGGYYDAGDAVKFNFPAAFSMTLLSWSVIEYSAKYEAVGELGHIRDTIKWGADYFLKTFNSTADTIDRVVMQVGSGATSPGSTQPNDHYCWMRPEDIDYPRPVVE 263          
BLAST of FC877895 vs. ExPASy Swiss-Prot
Match: GUN10_ORYSJ (Endoglucanase 10 OS=Oryza sativa subsp. japonica GN=GLU2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 59/156 (37.82%), Postives = 94/156 (60.26%), Query Frame = 3
Query:  465 KYAEALKVAMQFFDVQKSGKLV-NNKISWRGDSALKDGRD---MGLDLTKGMYDAGDHMKFGFPMAFTATVLSWAILEYGDQMDVVDQLQPAQDSLKWITDYLI----SAHPKENVLIVQVGHPD--------KDHKCWERPESMAEGRPLTQVNT 884
            +Y +AL  A+ FF+ Q+SG L  +N +SWRG+S +KDG     +   L  G YDAGD +KF +PMA++ T+LSW+++EY  + + + +L   ++ +KW TDYL+    S+    + ++ QVG  D         DH CW RPE +   RP+T+ ++
Sbjct:  109 QYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRKSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHVKELIKWGTDYLLKTFNSSADTIDRIVAQVGVGDTSKGGAQPNDHYCWMRPEDIDYPRPVTECHS 264          
The following BLAST results are available for this feature:
BLAST of FC877895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN19_ORYSJ3.828e-2845.32Endoglucanase 19 OS=Oryza sativa subsp. japonica G... [more]
GUNG_CLOCE1.455e-2742.45Endoglucanase G OS=Clostridium cellulolyticum (str... [more]
GUN24_ARATH1.455e-2745.00Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN22_ARATH2.743e-2644.62Endoglucanase 22 OS=Arabidopsis thaliana GN=At4g38... [more]
GUN7_ARATH1.042e-2544.90Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUN23_ARATH2.322e-2544.62Endoglucanase 23 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN25_ARATH3.961e-2541.29Endoglucanase 25 OS=Arabidopsis thaliana GN=KOR PE... [more]
GUN12_ORYSJ8.825e-2543.33Endoglucanase 12 OS=Oryza sativa subsp. japonica G... [more]
GUN9_ORYSJ4.380e-2439.47Endoglucanase 9 OS=Oryza sativa subsp. japonica GN... [more]
GUN10_ORYSJ5.720e-2437.82Endoglucanase 10 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA94CE06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CE06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877895 ID=FC877895; Name=FC877895; organism=Citrus clementina; type=EST; length=884bp
AAAATAAAATAACGAATAAACCCGCGTGACTGACCTCTGTCGGTGATCAA
AGAAATTAAAGAAAATTGACGATCTGATTTGTCCCAGACCCAGCTGCTTC
AATTGTATTGTATTAGAGAATTTGCAAAACTGATTCAGCAGCCAAATTAA
GCTTCTTACCACTCACATTTCACCCACTAGAGAGAAATACGGTGCTGCGT
TTTTCACCGTTTGAAGACCCTACGCACAAAGCTCTTACTCTCTTCACCCA
ATGCCGGCATTTTGAGTTAGATTTAGATCTGAGAACTTGACGGCATTGTG
TTAAAATGGGGGAGAAATCAAAGTCCAAGGGTTGTTTCGGATGGTTCTTG
GTCCTAGTCCTATTGGCTCTAGTTGTTGGCGCAATTGTTTACACTATTAA
AAAGAAAACAAGTCACTCTGATAAGCCGGCTCCAGTTCCCGGTCCCCCCG
GCGCCGTCGAGAAAAAGTATGCTGAAGCCCTCAAAGTCGCAATGCAGTTC
TTCGACGTACAAAAATCGGGAAAGTTGGTGAATAATAAGATATCATGGAG
AGGGGATTCGGCTCTTAAAGATGGAAGAGACATGGGTTTGGATCTCACAA
AAGGCATGTATGATGCTGGGGATCATATGAAGTTTGGGTTTCCGATGGCT
TTTACTGCGACTGTGTTGTCGTGGGCCATCCTTGAGTATGGAGATCAGAT
GGACGTTGTGGATCAGTTGCAACCAGCTCAGGATTCTCTCAAGTGGATCA
CTGATTATCTTATCAGTGCTCATCCCAAAGAGAATGTCCTTATTGTTCAG
GTGGGGCATCCTGATAAGGACCACAAATGTTGGGAAAGACCTGAAAGCAT
GGCTGAAGGGAGACCACTCACTCAGGTCAACACA
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