FC919299

Overview
NameFC919299
Unique NameFC919299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length2452
Libraries
Library NameType
PCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC919299_ssr41 microsatellite FC919299_ssr41:41..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10441 contig Ccv1_Contig10441:19..2470. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 976.082 bits (2522), Expect = 0.000e+0
Identity = 493/688 (71.66%), Postives = 572/688 (83.14%), Query Frame = 1
Query:  205 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 2250
            D LNWG  A  + GSHL+EVKRMVA++R+P+V + G TL V QVAA+A     +   VEL E AR  VKASS+W++  +  G D YGVTTGFG TSHR TK+G ALQ EL++ LNAGIFG G+   HTLP    RAAMLVR+NTLLQGYSGIRFEIL+AITKLLN  +TPCLPLRGTITASGDLVPLSYIAGL+TGRPN++A  P+G+ +D  EA K AG   GFF L PKEGLA+VNGT+VGS LA+ V+F+AN LA+LSE+LSA+F EVM GKPE+TDHLTHKLKHHPG IEAAAIMEHIL GSS+++ AKK++E+DPL KPKQDRYALRTSPQWLGPQIE+IR ATKSIERE+NSVNDNP+IDV R KALHGGNFQGTPIGVSMDN RLAIA IGKLMFAQFSELVN+FYNNGL SNL+G RNPSLDYGFKG EIAMASYCSELQ+LANP+TNHV SAEQHNQDVNSLGL+S+RKT EAVDILKLM+ST++VALCQA+DLRHLEEN+K +VKN V+QVAKKVLT+  +G+L  +RF EK+LL A DRE VF+Y DDPCSA YPLMQKLR VLVEHAL +G+ E  A  S+F KI  FEEEL++ LP+E+E AR  V NG+  + NRI E RS+PLYR VRE LG  FLTGEK+ SPGEE +KVF  + QGK+IDPML+CL+EWNG
Sbjct:   11 DPLNWGAAAAEMAGSHLDEVKRMVAQFREPLVKIQGATLRVGQVAAVAQAKDAAGVAVELDEEARPRVKASSEWILNCIAHGGDIYGVTTGFGGTSHRRTKDGPALQVELLRHLNAGIFGTGS-DGHTLPSETVRAAMLVRINTLLQGYSGIRFEILEAITKLLNTGVTPCLPLRGTITASGDLVPLSYIAGLITGRPNAQAISPDGRKVDAAEAFKLAGIEGGFFTLNPKEGLAIVNGTSVGSALAATVMFDANILAVLSEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGSIEAAAIMEHILAGSSFMSHAKKVNEMDPLLKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREVNSVNDNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNEFYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPITNHVQSAEQHNQDVNSLGLVSARKTLEAVDILKLMTSTYIVALCQAVDLRHLEENIKSSVKNCVTQVAKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDAEPEA--SVFSKITKFEEELRSALPREIEAARVAVANGTAPVANRIVESRSFPLYRFVREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNG 695          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 975.311 bits (2520), Expect = 0.000e+0
Identity = 505/687 (73.51%), Postives = 562/687 (81.80%), Query Frame = 1
Query:  205 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGIFGNGTKS---SHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFG-FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 2253
            D LNW V AE LKGSHLEEVK+MV +YRK  V LGGETLT+ QVAA+A+    VELSE AR GVKASSDWVMESMN+ TD+YG+TTGFG++S R T  G ALQKELI++LNAGIF  G +    S+TLP  ATRAAML+RVNTLLQGYSGIRFEIL+AIT LLN  ITP LPLRGTITASGDLVPLSYIAG L GRPNS++ GP+G+I+   EA K AG   FFEL+PKEGLALVNGTAVGS LAS VL++AN L + SE+ SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  A  LH+IDPLQKPKQDRYALRTSPQWLGPQIE+IR ATK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLA+A+IGKLMFAQF+ELVNDFYNNGLPSNLSGGRNPSLDYG KGAE+AMASYCSELQFLANPVTNHV SA QHNQDVNSLGLISSR TAEAV ILKLMS+T+LVALCQA DLRHLEE LK  V   VS  AK VL +       P R    D+L   +RE+VF+Y+DDP S T PLMQKLR VL + AL   E E     ++F+KI AFE ELK +LPKEVE  R   ENG+  + NRIK+CRSYPLYR VR  L +  LTGE V SPGE+FDKVF A+ QGK+IDP+ ECL+EWNGA
Sbjct:   13 DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVASGGPTVELSEEARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATGNEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTITASGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGVSSFFELRPKEGLALVNGTAVGSALASTVLYDANILVVFSEVASAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEALHLHKIDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVNDFYNNGLPSNLSGGRNPSLDYGLKGAEVAMASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTTAEAVVILKLMSTTYLVALCQAFDLRHLEEILKKAVNEVVSHTAKSVLAI------EPFR-KHDDILGVVNREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGE---TDTVFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNELETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGA 689          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PAL4_POPKI (Phenylalanine ammonia-lyase G4 (Fragment) OS=Populus kitakamiensis GN=PALG4 PE=3 SV=1)

HSP 1 Score: 947.577 bits (2448), Expect = 0.000e+0
Identity = 477/566 (84.28%), Postives = 519/566 (91.70%), Query Frame = 1
Query:  565 SSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTR-LAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 2253
            S+HTLPHSA+RAAMLVR+NTLLQGYSGIRFEIL+AITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA GPNG+ +   EA   AG   GFFELQPKEGLALVNGTAVGSGLASMVLFE N LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAA+MEHILDGSSYV  A+KLHEIDPLQKPKQDRYALRTSPQWLGP IE+IR +TK IEREINSVNDNPLIDVSRNKALHGGNF G+PIGVSMDNT  LAIA+IGKLMFAQFSELVND+YNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHV SAEQHNQDVNSLGLIS+RKTAEAV+IL +MS+T+LVALCQAIDLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLLK  DRE+VF YIDDPCSATYPLMQKLRQVLV+HAL NGE E+ +++SIFQKI AFEEELK +LPKEVE+AR  +ENG+P IPNRI + RSYPLY+ VRE LG+  LTGEKV SPGEEFDKVFTA+C GK+IDP    L+EWNGA
Sbjct:    1 STHTLPHSASRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGETMAAAEAFTLAGINGGFFELQPKEGLALVNGTAVGSGLASMVLFETNVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAVMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRTSTKMIEREINSVNDNPLIDVSRNKALHGGNFPGSPIGVSMDNTLVLAIASIGKLMFAQFSELVNDYYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILNVMSTTWLVALCQAIDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRFCEKDLLKVVDREYVFTYIDDPCSATYPLMQKLRQVLVDHALMNGEKEQNSSTSIFQKIGAFEEELKILLPKEVESARLELENGNPAIPNRITDRRSYPLYKFVREELGTVLLTGEKVGSPGEEFDKVFTAICAGKLIDPCWSVLKEWNGA 566          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 935.25 bits (2416), Expect = 0.000e+0
Identity = 472/589 (80.14%), Postives = 525/589 (89.13%), Query Frame = 1
Query:  136 ENGHQNGGLE----GLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGF--GFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPC 1869
            +N H NG ++     LCK  NY       LNW + A++L+GS L++VK+MV E+RKP+V LGGETLTVAQVA+IA     ++   VELSESAR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHR TKNGG LQK LI+FLNAG+FG GT+S+HTLPHSATRAAMLVR+NTLLQGYSGIRFEIL+AITKL+N NI+PCLPLRGT+TASGDLVPLSYIAGLLTGRPNSKA GP G  +D +EA + AG   GFFELQPKEGLALVNGTAVGS +AS+VLFE+N LA++ E+LSAIFAEVM GKPEFTD+LTHKLKHHPGQIEAAAIMEHILDGSSYV  A+KLHE+DPLQKPKQDRYALRTSPQWLGPQIE+IR ATK IEREINSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHV SAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+G  GELHP+RFCEK+LL+  DRE++FAY DDPC
Sbjct:    7 QNEHINGEVKEVLWNLCKKQNYL-----PLNWEMAADSLRGSKLDQVKKMVDEFRKPIVKLGGETLTVAQVASIANVDNKSNGVRVELSESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGTLQKNLIRFLNAGVFGIGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNISPCLPLRGTVTASGDLVPLSYIAGLLTGRPNSKAVGPTGSKLDAEEAFRVAGVTGGFFELQPKEGLALVNGTAVGSAMASIVLFESNILAVMFEVLSAIFAEVMNGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGVLGELHPARFCEKELLRVVDREYLFAYADDPC 590          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 894.034 bits (2309), Expect = 0.000e+0
Identity = 458/699 (65.52%), Postives = 549/699 (78.54%), Query Frame = 1
Query:  166 GLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEY-RKPVVNLGGETLTVAQVAAIAT-SSTNVEL-SESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGF-FELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNG 2250
            GLC   ++  S  D LNW   A+ ++GSH EEVK MV  Y     +++ G++LT++ VAA+A  S   V+L + +A+  V+ SS+WV+  M KGTD+YGVTTGFGATSHR T  G  LQKELI+FLNAG+ G   ++   L    TRAAMLVR NTLLQGYSG+R++IL+ + KLLN  +TP LPLRGTITASGDLVPLSYIAGLLTGRPNS+    +G  +   EA K  G    FELQPKEGLA+VNGT+VG+ LAS+V F+AN LALLSE++SA+F EVM GKPEFTD LTHKLKHHPGQ+EAAAIME++LDGSSY+  A KLHE++PLQKPKQDRY LRTSPQWLGPQ+E+IR AT  IEREINSVNDNP+IDV+R+KALHGGNFQGTPIGVSMDN RL+I+AIGKLMFAQFSELVND+YN GLPSNLSGG NPSLDYG KGAEIAMASY SEL +LANPVT+HV SAEQHNQDVNSLGL+S+RK+AEA+DILKLM ST+L ALCQA+DLRHLEEN+  TVK  VSQVAKK L+ G +GEL P RFCEKDLL+  D EHVF+YIDDPC+A+YPL QKLR +LVEHA  N E EK  N+SIF KI  FE ELK  L  +V  AR++ + G+  +P+RI+ECRSYPLY  VR  LG+  L+G +  SPGE  + V+ A+ + K+I P+ +CL  W G
Sbjct:   19 GLC--TDFGSSGSDPLNWVRAAKAMEGSHFEEVKAMVDSYFGAKEISIEGKSLTISDVAAVARRSQVKVKLDAAAAKSRVEESSNWVLTQMTKGTDTYGVTTGFGATSHRRTNQGAELQKELIRFLNAGVLGKCPEN--VLSEDTTRAAMLVRTNTLLQGYSGVRWDILETVEKLLNAWLTPKLPLRGTITASGDLVPLSYIAGLLTGRPNSRVRSRDGIEMSGAEALKKVGLEKPFELQPKEGLAIVNGTSVGAALASIVCFDANVLALLSEVISAMFCEVMNGKPEFTDPLTHKLKHHPGQMEAAAIMEYVLDGSSYMKHAAKLHEMNPLQKPKQDRYGLRTSPQWLGPQVEIIRSATHMIEREINSVNDNPVIDVARDKALHGGNFQGTPIGVSMDNLRLSISAIGKLMFAQFSELVNDYYNGGLPSNLSGGPNPSLDYGLKGAEIAMASYTSELLYLANPVTSHVQSAEQHNQDVNSLGLVSARKSAEAIDILKLMLSTYLTALCQAVDLRHLEENMLATVKQIVSQVAKKTLSTGLNGELLPGRFCEKDLLQVVDNEHVFSYIDDPCNASYPLTQKLRNILVEHAFKNAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPDRIQECRSYPLYEFVRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGWKG 713          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0
Identity = 412/501 (82.24%), Postives = 454/501 (90.62%), Query Frame = 1
Query:  757 YIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFG--FFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 2253
            YIAGLLTGRPNSKA GP+G ++  ++A + A     F+ELQPKEGLALVNGTAVGSG+AS+VLF+AN LA+LSE+LSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY+  AKKLHEIDPLQKPKQDRYALRTSPQWLGP IE+IRF+TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT+HV SAEQHNQDVNSL LIS+RKT E+++ILKLMSSTFL+ LCQAIDLRHLEENLK +VKNTVSQV+K+ LT G +GELHPSRFCEKDLLK  DRE+VF+YIDDP S TYPLMQKLRQVLV+HAL N ENEK  N+SIFQKIA FEEELKT+LPKEVE+ R   E+G   IPN+IKECRSYPLY+ VRE LG+  LTGEKV SPGEEFDK+FTA+CQGKIIDP+LECL EWNGA
Sbjct:    1 YIAGLLTGRPNSKAVGPSGVVLTAKQAFELANINSEFYELQPKEGLALVNGTAVGSGMASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLDLISARKTNESIEILKLMSSTFLMGLCQAIDLRHLEENLKSSVKNTVSQVSKRTLTTGGNGELHPSRFCEKDLLKVVDREYVFSYIDDPYSGTYPLMQKLRQVLVDHALINAENEKDVNTSIFQKIATFEEELKTILPKEVESTRAAYESGKAAIPNKIKECRSYPLYKFVREELGTGLLTGEKVKSPGEEFDKLFTAICQGKIIDPLLECLGEWNGA 501          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 741.88 bits (1914), Expect = 0.000e+0
Identity = 365/411 (88.81%), Postives = 386/411 (93.92%), Query Frame = 1
Query: 1021 TDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 2253
            TDHLTHKLKHHPGQIEAAAIMEHILDGSSYV  AKKLHE+DPLQKPKQDRYALRTSPQWLGP IE+IR +TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSG RNPSLDYGFKGAEIAMASYCSELQFLANPVTNHV SAEQHNQDVNSLGLISSRKTAEAVDILKLMS+T+LVALCQAIDLRHLEENLK TVK TVS VAKK LT+GA+GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPLMQK+RQVLVEHALNNGE+EK  ++SIFQKI AFEEELK VLPKEVE+AR  VE+G+P+IPNRIKECRSYPLY+ VRE LG+  LTGEKV SPGE+FDKVFTAMC+GKIIDP+L+CL  WNGA
Sbjct:    1 TDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAKKLHEMDPLQKPKQDRYALRTSPQWLGPHIEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGSRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVESAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQAIDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKVRQVLVEHALNNGESEKNGSTSIFQKIGAFEEELKAVLPKEVESARDGVESGNPSIPNRIKECRSYPLYKFVREELGTGLLTGEKVRSPGEDFDKVFTAMCEGKIIDPLLDCLSAWNGA 411          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 3.565e-103
Identity = 183/228 (80.26%), Postives = 203/228 (89.04%), Query Frame = 1
Query: 1570 EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREGLGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 2253
            EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQ+IDLRHLEENL++TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLR+VL+EHAL NGE+EK A++SIFQKI AFEEELK +LPKEVE+AR  +E G+  +PNRI ECRSYPLY+ VRE LG  +LTGEKV SPGEE DKVF A+CQGKIIDP+L CL  WNGA
Sbjct:    3 EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQSIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAVPNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGA 230          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PALY_RHORB (Phenylalanine ammonia-lyase OS=Rhodotorula rubra GN=PAL PE=3 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 2.316e-94
Identity = 216/536 (40.30%), Postives = 316/536 (58.96%), Query Frame = 1
Query:  220 GVMAETLKGSHLEEVKRMVAEY-RKPVVNLGGETLTVAQVAAIATSSTNVELSESA--REGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGI-------FGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKP-EFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY-VNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREI-NSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGEL 1788
            G +  T + + L+ V+R++A+      + L G TLT+  V   A    +V++++S   RE + AS +++   ++     YGVTTGFG ++   T++  +LQK L++    G+       F  G    ++LP    R AM +RVN+L +G+S +R  +L+A+T  LNH ITP +PLRGTI+ASGDL PLSYIA  +TG P+SK    +G+I+  QEA    G     L PKEGL LVNGTAV + +A++ L +A+ L+LL++ L+A+  E M G    F   L    + HP QIE A  +  +L+GS Y V+   ++   D     +QDRY LR SPQWLGP +  +  A   +  E   S  DNPLID+      HGG F  + +G +M+ TRLA+A +GK+ F Q +E++N   N  LPS L+   +PSL Y  KG +IA A+Y SEL  LANPV+ HV  AE  NQ +NSL LIS+R+TAEA D+L L+ +T L  + QA+DLR +E       +  V+++ K+     A+ E+
Sbjct:   39 GSLLPTTETTQLDIVERILADAGATDQIKLDGYTLTLGDVVGAARRGRSVKVADSPHIREKIDASVEFLRTQLDNSV--YGVTTGFGGSADTRTEDAISLQKALLEHQLCGVLPTSMDGFALGRGLENSLPLEVVRGAMTIRVNSLTRGHSAVRIVVLEALTNFLNHGITPIVPLRGTISASGDLSPLSYIAASITGHPDSK-VHVDGKIMSAQEAIALKGLQPVVLGPKEGLGLVNGTAVSASMATLALTDAHVLSLLAQALTALTVEAMVGHAGSFHPFLHDVTRPHPTQIEVARNIRTLLEGSKYAVHHETEVKVKDDEGILRQDRYPLRCSPQWLGPLVSDMIHAHAVLSLEAGQSTTDNPLIDLENKMTHHGGAFMASSVGNTMEKTRLAVALMGKVSFTQLTEMLNAGMNRALPSCLA-AEDPSLSYHCKGLDIAAAAYTSELGHLANPVSTHVQPAEMGNQAINSLALISARRTAEANDVLSLLLATHLYCVLQAVDLRAMEFEHTKAFEPMVTELLKQHFGALATAEV 570          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: PALY_RHOTO (Phenylalanine ammonia-lyase OS=Rhodosporidium toruloides GN=PAL PE=1 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 1.271e-92
Identity = 251/710 (35.35%), Postives = 366/710 (51.55%), Query Frame = 1
Query:  196 SSGDALNWGVMAETLKGSHL--------EEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSES--AREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAGI-------FGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK---ATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKP-EFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY-VNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREI-NSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADR-EHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEV-ENARQTVENGSPTIPNRIKECRSYPLYRLVREGLG-----SNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECL 2235
            S+  A+N       + GSHL        + V++M+A      + L G +L +  V + A     V + +S   R  +  S +++   ++     YGVTTGFG ++   T++  +LQK L++    G+       F  G    ++LP    R AM +RVN+L +G+S +R  +L+A+T  LNH ITP +PLRGTI+ASGDL PLSYIA  ++G P+SK         +I+  +EA          L PKEGL LVNGTAV + +A++ L +A+ L+LLS+ L+A+  E M G    F   L    + HP QIE A  +  +L+GS + V+  +++   D     +QDRY LRTSPQWLGP +  +  A   +  E   S  DNPLIDV    + HGGNFQ   +  +M+ TRL +A IGKL F Q +E++N   N GLPS L+   +PSL Y  KG +IA A+Y SEL  LANPVT HV  AE  NQ VNSL LIS+R+T E+ D+L L+ +T L  + QAIDLR +E   K      +  +  +      +G        EK     A R E   +Y  D     +         +VE   +   +    N+    K+AA E  +   L ++V E         SP +       R+  LY  VRE LG      +   G++  + G    K++ A+  G+I + +L+ L
Sbjct:   18 SAKQAVNGASTNLAVAGSHLPTTQVTQVDIVEKMLAAPTDSTLELDGYSLNLGDVVSAARKGRPVRVKDSDEIRSKIDKSVEFLRSQLSMSV--YGVTTGFGGSADTRTEDAISLQKALLEHQLCGVLPSSFDSFRLGRGLENSLPLEVVRGAMTIRVNSLTRGHSAVRLVVLEALTNFLNHGITPIVPLRGTISASGDLSPLSYIAAAISGHPDSKVHVVHEGKEKILYAREAMALFNLEPVVLGPKEGLGLVNGTAVSASMATLALHDAHMLSLLSQSLTAMTVEAMVGHAGSFHPFLHDVTRPHPTQIEVAGNIRKLLEGSRFAVHHEEEVKVKDDEGILRQDRYPLRTSPQWLGPLVSDLIHAHAVLTIEAGQSTTDNPLIDVENKTSHHGGNFQAAAVANTMEKTRLGLAQIGKLNFTQLTEMLNAGMNRGLPSCLA-AEDPSLSYHCKGLDIAAAAYTSELGHLANPVTTHVQPAEMANQAVNSLALISARRTTESNDVLSLLLATHLYCVLQAIDLRAIEFEFKKQFGPAIVSLIDQHFGSAMTGSNLRDELVEKVNKTLAKRLEQTNSY--DLVPRWHDAFSFAAGTVVEVLSSTSLSLAAVNA---WKVAAAESAIS--LTRQVRETFWSAASTSSPAL--SYLSPRTQILYAFVREELGVKARRGDVFLGKQEVTIGSNVSKIYEAIKSGRINNVLLKML 715          
The following BLAST results are available for this feature:
BLAST of FC919299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
PAL1_ORYSJ0.000e+071.66Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL3_ARATH0.000e+073.51Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL4_POPKI0.000e+084.28Phenylalanine ammonia-lyase G4 (Fragment) OS=Popul... [more]
PAL2_SOLTU0.000e+080.14Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]
PALY_PINTA0.000e+065.52Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PAL1_PHAVU0.000e+082.24Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PALY_VITVI0.000e+088.81Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PALY_MALDO3.565e-10380.26Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PALY_RHORB2.316e-9440.30Phenylalanine ammonia-lyase OS=Rhodotorula rubra G... [more]
PALY_RHOTO1.271e-9235.35Phenylalanine ammonia-lyase OS=Rhodosporidium toru... [more]

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Properties
Property NameValue
Genbank descriptionC06055A01T7 PCR Citrus clementina cDNA clone C06055A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC919299 ID=FC919299; Name=FC919299; organism=Citrus clementina; type=EST; length=2452bp
AATTTCCTTTAGCTCATTCATTCTTCATCACTCCCATTCATTCTTCTTCT
TCTTCTTCTTCTTTCTACAGTTTTGGTATTTTTTGTAATTGCAGTAACAT
TTACGTAAAACGATATGGAGATAGGTGCCACTACTGAGAATGGTCACCAG
AACGGTGGCCTGGAGGGTTTGTGCAAGAATAACAATTACAATTACAGTTC
TGGGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAAGGGAGCC
ATTTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTC
AACCTCGGTGGTGAGACGTTGACCGTAGCACAAGTGGCTGCCATTGCCAC
GTCCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGG
CCAGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTAC
GGCGTTACCACTGGCTTTGGTGCCACTTCTCATCGGACAACCAAGAACGG
CGGTGCTCTTCAAAAGGAGCTCATTAAATTTTTGAACGCTGGAATCTTTG
GAAACGGAACAAAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCA
GCCATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCG
ATTTGAAATCCTGAAAGCGATCACAAAGCTGCTCAATCACAACATCACTC
CATGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCT
CTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAAGGCCAC
CGGGCCCAATGGACAGATCATTGATCCCCAGGAAGCCTCTAAACCAGCGG
GTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTGTCAAT
GGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAA
CAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCA
TGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCAC
CATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGG
CAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGC
AGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTC
GGCCCTCAGATCGAAATGATTCGGTTTGCAACCAAGTCTATTGAACGGGA
GATCAACTCGGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGG
CCTTACATGGTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGAC
AATACCCGTTTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATT
TTCTGAACTTGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGT
CTGGTGGCAGGAATCCCAGCCTGGATTATGGTTTCAAGGGCGCTGAAATT
GCTATGGCTTCCTATTGTTCGGAGCTCCAATTTCTTGCCAATCCTGTTAC
TAACCACGTCCATAGTGCTGAACAGCACAACCAAGATGTAAACTCCTTGG
GATTGATCTCTTCCAGGAAGACTGCTGAAGCAGTCGACATCCTGAAGCTC
ATGTCTTCCACATTCTTGGTAGCGCTTTGCCAGGCTATTGATTTGAGACA
TTTGGAGGAAAATTTGAAGCACACAGTCAAGAATACTGTCAGCCAAGTAG
CTAAGAAAGTCTTAACCGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGA
TTCTGTGAGAAGGATCTGCTCAAAGCGGCTGATCGCGAACACGTCTTTGC
ATACATTGATGACCCCTGCAGTGCTACCTATCCATTGATGCAAAAGCTAA
GGCAAGTACTTGTTGAGCACGCACTGAACAATGGAGAGAACGAGAAGACT
GCCAACTCTTCAATCTTCCAGAAGATTGCAGCCTTTGAGGAGGAATTGAA
AACCGTTTTGCCGAAAGAAGTTGAGAATGCCAGGCAGACTGTTGAGAATG
GAAGTCCAACAATTCCCAACAGGATCAAAGAATGCAGGTCTTACCCGTTG
TACAGGTTAGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAA
AGTTACATCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCC
AGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGC
GCCCCTCTTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTC
TTCAATCCCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGT
GGTACAAATCCATCTGTAATATTTCAATCACTTCTATTGGTTTTTTCATA
TAAGGTTATAAGACTTATTGTCCTTTATTTTAAAAAAAAAAAAAAAAAAA
AA
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