FC919304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA +P +CG+ +PY IS S DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AITCGQV +++ PC+ + R GG P CCSGVRSL AA TT DR+ ACNCLK A I+G+ AA +P +CG+ +PY IS S DCSRV Sbjct: 25 AITCGQVNSAVGPCLTYAR-GGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.302e-23 Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC CLK +I+GI +G+P +CG+ +P+ IS STDC++V Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23 Identity = 51/91 (56.04%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 115 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 ITCG V++ LAPCI +L+ G CC G+++LN AA TTPDR+ ACNCLK A I+GI AAGLP CG+ IPY ISPST+C+ V Sbjct: 28 ITCGMVSSKLAPCIGYLKGGPL--GGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.632e-23 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 109 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 +AI+CGQVT+ L PC +L GG PP CC+GVR LN AA+TTPDRQ AC CLK I N A LP +CGI I YKI+P+ DCS++ Sbjct: 24 DAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNC-LKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AI+CGQV++++ PC+ + R G P C SGVRSLN AARTT DR+AACNC LK A + G+ A+ +P +CG+R+PY IS S DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPN--VAAGLPXQCGIRIPYKISPSTDCSRVR 390 A++CGQV +L PCI ++ GG P CC+GVRSL A+TT DRQ+ CNCLK+A I N +AAGLP +CG+ IPYKISPSTDC ++ Sbjct: 30 AVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 100 PVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P+T+ A++CG V ++LA CI ++ GG PP CCSGV++LN A+TTPDRQ ACNC++ RA G+ G+ AAG+P CG+ IPYKIS ST+C VR Sbjct: 20 PITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.768e-22 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 P+ AITCG V + LAPCI +L+ G P CC G++SLN AA + DR+ AC CLK A +I+GI AA LP QCG+ +PY ISP+T+C+ + Sbjct: 22 PLAEAITCGLVASKLAPCIGYLQ-GAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21 Identity = 47/91 (51.65%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 115 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 ++CG V LAPCI +LR+ G P CC+GV++L +A TT DR+ AC CL A +I G+ +AAGLP +CG+ IPYKISPST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90 The following BLAST results are available for this feature:
BLAST of FC919304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919304 ID=FC919304; Name=FC919304; organism=Citrus clementina; type=EST; length=607bpback to top |