FC920175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2389_STAAR (Putative 2-hydroxyacid dehydrogenase SAR2389 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2389 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2305_STAAM (Putative 2-hydroxyacid dehydrogenase SAV2305 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2305 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2296_STAAC (Putative 2-hydroxyacid dehydrogenase SACOL2296 OS=Staphylococcus aureus (strain COL) GN=SACOL2296 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2254_STAA3 (Putative 2-hydroxyacid dehydrogenase SAUSA300_2254 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2254 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2224_STAAW (Putative 2-hydroxyacid dehydrogenase MW2224 OS=Staphylococcus aureus (strain MW2) GN=MW2224 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2196_STAAS (Putative 2-hydroxyacid dehydrogenase SAS2196 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2196 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 52/177 (29.38%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 55/177 (31.07%), Postives = 94/177 (53.11%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGC-CVSYN-----SRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLINKQS 653 A+ + V AE+L P++++V GL+++DV RGV + NA A++AL LL+ R+++ AD +R +W + F G+++ GK VG+VGLG IG VA R+ AFG ++Y+ +R + + + D L A +D + + T +T LI+K++ Sbjct: 46 ALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWK-RSSFS-GTEIFGKTVGVVGLGRIGQLVAARIAAFGAHVIAYDPYVAPARAAQLGIELMSFDD---LLARADFISVHLPKTPETAGLIDKEA 217
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GRHPR_HUMAN (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 57/181 (31.49%), Postives = 88/181 (48.62%), Query Frame = 3 Query: 120 LHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPL-GSKLGGKRVGIVGLGSIGSEVAKRLEAFGC-CVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINK 647 L H K I +AGA ++++ S G++H+ + E ++RG+ + +V ++ A+ A+ LL+ R+L A V+ G W L G L VGI+GLG IG +A+RL+ FG Y R +P F + ELAA SD +++ C+LT T L NK Sbjct: 59 LSDHVDKRILDAAGA-----------NLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNK 228
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y2178_STAAB (Putative 2-hydroxyacid dehydrogenase SAB2178 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB2178 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15 Identity = 51/177 (28.81%), Postives = 85/177 (48.02%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 A+ S V +++ +++++ AG N+ID+ R + + + N + AD +GL++ + R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R AF V Y N+K Y D+ L N+D + I A + HHLI+ + Sbjct: 47 ALISLLSTNVDKDVIDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAIARRIVEGDQLSRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTE 220 The following BLAST results are available for this feature:
BLAST of FC920175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920175 ID=FC920175; Name=FC920175; organism=Citrus clementina; type=EST; length=687bpback to top |