FC920175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y606_STAS1 (Putative 2-hydroxyacid dehydrogenase SSP0606 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0606 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 48/176 (27.27%), Postives = 82/176 (46.59%), Query Frame = 3 Query: 141 AIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVR----QGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINK 647 A+ S V E++ ++++ AG N++D+ R++ + + N + A+ L++ V R++ D R G P+ F G ++ GK +GI+GLG IGS VA+R +AF + Y ++K Y D+ L N+D + I A HH I+K Sbjct: 48 ALISLLSTSVDKEVIDAANNLKIITNYGAGFNNVDIDYARQQNIDVTNTPKASTNSTAELTFALVLAVARRIPEGDKLCRTTGFDGWAPL---FFRGREVSGKTIGIIGLGEIGSAVARRAKAFDMNILYTGPHQKVDKEREIGAKYVDLETLLKNADFVTINAAYNPSLHHQIDK 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: TKRA_DICDI (Probable 2-ketogluconate reductase OS=Dictyostelium discoideum GN=tkrA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 49/165 (29.70%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 168 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLIN 644 + +L P + V A S G ++ D+V R + L + NV ++ +AD +GL+I V RKL+ D +R G W P++ + G ++ K+VGI+G+G IG +AKR F V+Y SR++ V + + D+ + + SD + + + +T H + Sbjct: 65 IDENVLSKAPFLECVSAISVGYDNYDLVVLNDRKIPLMHTPNVLNDSMADIMMGLMITVARKLAYCDKRMRNGEWNGPLDKSW-FGLEVHHKKVGIIGMGRIGEVLAKRCRMGFDMEVAYYSRSRHLKVEELYDAKHQDLDTILSTSDFICVVLPGSQETKHFFS 228
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ERWCT (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia carotovora subsp. atroseptica GN=ghrB PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWP--INAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G V + L+ P +R S G + +V +GV L + V +E VAD L L++ R++ V+ G W + +++ G+ + K +GI+G+G IG VA+R F V YN+R F C+ L A SD L I LT +THHLI ++ Sbjct: 48 SGGKVDKDFLQHAPRLRAASTISVGYDTFNVDALNEKGVILMHTPTVLTETVADTVLALMLASARRVVEVVERVKAGEWKGGVGSDW-FGTDVHHKTIGILGMGRIGLAVAQRAHFGFSMPVLYNARRHHAEAEERFNARHCDLDTLLAESDFLCITLPLTAETHHLIGRE 217
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 58/207 (28.02%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R + F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAQFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_SHIFL (Glyoxylate/hydroxypyruvate reductase B OS=Shigella flexneri GN=ghrB PE=3 SV=4) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 58/207 (28.02%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSV---KAIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ ++ +H+ L +V AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R+ F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQAHFTVHQVANLSPQTVVQNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRVHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLI (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12) GN=ghrB PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECODH (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12 / DH10B) GN=ghrB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOBW (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12 / BW2952) GN=ghrB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VTA+++ ++++V G++++D+ R+GV + N N S A+ G+L+ + R++ A ++ G W + + +G++L GK +GI+GLG IG EVA R++AFG Sbjct: 39 EELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKW--DRKKFMGTELNGKTLGILGLGRIGREVAARMQAFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_SHIBS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 4 (strain Sb227) GN=ghrB PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221 The following BLAST results are available for this feature:
BLAST of FC920175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920175 ID=FC920175; Name=FC920175; organism=Citrus clementina; type=EST; length=687bpback to top |