FC920176

Overview
NameFC920176
Unique NameFC920176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15502 contig Ccv1_Contig15502:3..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.441e-41
Identity = 91/178 (51.12%), Postives = 122/178 (68.54%), Query Frame = 1
Query:  151 EEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQL-SSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            +E+    M+L  SS+LPM +K  IEL +LEI+AKA P  L S S+IAS LPT N +A  +LDR+LRLLASYS L  +L    DG V  +YGLASVC++L  NEDGVS++P+ L+ ++KV ++ WYHLKD +LEG +PF KA+     FEY   D R   +F   MS+H+ + MKKIL+
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYG-MTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILE 192          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.658e-40
Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = 1
Query:  109 MSSFHDQLMKPPNDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            MSS  +      ++EE+F+  M+LA +S+LPM +K+ IEL +LE++ KA     +S +E+A+QL T N EA  +LDR+LRLL SY+ L   L T  DG V  +YGLA VC++L  NEDGVS+AP+ L+ ++KV ++ WYHLKD +L+G +PF KA+     FEY   D R   +F   MSNH+ + MKKIL+
Sbjct:    1 MSSTANNPQINSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILE 191          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.165e-40
Identity = 88/179 (49.16%), Postives = 123/179 (68.72%), Query Frame = 1
Query:  148 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            ++E F+  M+LA +S+LPM +K+ +EL +LEI+AKA P + +S SE+A+QLPT N EA  +LDRMLRLLA+YS L   L T  DG V  +Y LA VC+ L  N DGVS+AP+ L+ ++KV ++ WYHL D +L+G +PF KA+     FEY   D R   +F   MS+H+ + MKKIL+
Sbjct:   12 EDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYG-MTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILE 189          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.828e-40
Identity = 87/179 (48.60%), Postives = 123/179 (68.72%), Query Frame = 1
Query:  148 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            +EE  +  M LA +S+LPM +K+ IEL +LE++ K+ P + +S SE+A+QLPT N +A  +LDR+LRLLASYS L   L    DG +  +Y LA VC++L  NEDGVS+A + L+ ++KV ++ WYHLKD +LEG +PF KA+     FEY  KD R   +F   MSNH+ ++MKKIL+
Sbjct:   16 EEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYG-MTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILE 193          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.083e-39
Identity = 89/178 (50.00%), Postives = 119/178 (66.85%), Query Frame = 1
Query:  151 EEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQL-SSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            +E+    ++L  SS+LPM +K  IEL +LEI+AKA P  L   S+IAS LPT N  A  +LDR+LRLLASYS L  +L    DG V  +YGLASVC++L  NEDGVS++P+ L+ ++KV ++ WYHLKD +LEG +PF KA+     FEY   D R   +F   MS H+ + MKKIL+
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYG-MTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILE 192          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.083e-39
Identity = 83/180 (46.11%), Postives = 123/180 (68.33%), Query Frame = 1
Query:  145 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            ++EE+F+  M+LA +S+LPM +K+ IEL +LE++ K+     +S  ++A+QLPT N +A  +LDR+LRLL SY+ L   L T  DG V  +YGLA VC++L  NEDGVS+AP+ L+ ++KV ++ WYHL D +++G +PF KA+     FEY   D R   +F   MSNH+ + MKKIL+
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYG-MTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILE 191          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 1
Query:  163 MLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            +  M+LA +S+LP  + A IEL +LEI+A+A P + L+  E+ASQLPT N +A  +LDR+ RLLASYS LT  L    +G V  +YGLA +C++L+ NEDGVSLAP+ L+ +++V ++ WY++KD +LEG +PF KAH     F+Y   D R   +F   MS+H+ ++MKKIL+
Sbjct:    3 LFAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHG-MTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILE 175          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.026e-38
Identity = 86/178 (48.31%), Postives = 121/178 (67.98%), Query Frame = 1
Query:  148 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            D+E  +  M+LA +S+LPM +K+ +EL +LEI+AK + S +S +EIAS+LPT N EA  +LDR+LRLL SYS LT +        V  +YGL  VC+YL  NEDGVS+A + L+ ++KV ++ WYHLKD +L+G +PF KA+   + FEY   D R   +F   MSNH+ + MKKIL+
Sbjct:   16 DDEAALFAMQLASASVLPMALKSALELDLLEIMAK-NGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYG-MSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILE 191          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.896e-38
Identity = 85/180 (47.22%), Postives = 121/180 (67.22%), Query Frame = 1
Query:  148 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLP-TNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKILK 681
            D++ F+  M+LA +S+LPM +K  IEL +LE +AKA P   +SSSE+ +QLP  NN EA  ++DR+  LLASYS LT  L    DG     YGLA VC++L+ N+ GVSLAP+ L+ ++KV ++ WY+LKD +L+G +PF KA+   + FEY  KD R   +F   M NH+ + MKKI++
Sbjct:    6 DDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYG-MSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVE 184          
BLAST of FC920176 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.955e-34
Identity = 80/185 (43.24%), Postives = 118/185 (63.78%), Query Frame = 1
Query:  148 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKAS-------PSQLSSSEIASQLPTN-NQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVCGVYGLASVCRYLLPNEDGVSLAPIFLLAREKVSVDPWYHLKDCLLEGTLPFMKAHNTKNPFEYAMKDARRRNLFKIIMSNHTALVMKKIL 678
            DEE  M  ++LA SS+LPMT+K  IELG+LE L  A+        + L+ +E+A +LP+  N  A+ ++DRMLRLLASY+ +   +    DG +   Y  A VC++L PNEDGVS+A + L+ ++KV ++ WY+LKD +L+G +PF KA+     FEY   DAR   +F   M NH+ ++ KK+L
Sbjct:   13 DEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYG-MTAFEYHGTDARFNRVFNEGMKNHSVIITKKLL 196          
The following BLAST results are available for this feature:
BLAST of FC920176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT3_POPKI7.441e-4151.12Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA1.658e-4046.88Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPAN2.165e-4049.16Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CATRO2.828e-4048.60Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_POPTM4.083e-3950.00Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_OCIBA4.083e-3946.11Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_EUCGL5.333e-3947.70Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
OMT1_ARATH2.026e-3848.31Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_ZINEL5.896e-3847.22Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_ORYSJ3.955e-3443.24Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC32005A04EF RVDevelop1 Citrus clementina cDNA clone C32005A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920176 ID=FC920176; Name=FC920176; organism=Citrus clementina; type=EST; length=682bp
ATAACTAATATATCTATACGTGTATCTATATAGTTATATACTGAGCGCTC
ATCAACATCATCCATTGCCATTTTGTTAATTTCAGCATATCCTACTCCGA
GAATTAAGATGAGTTCATTCCATGACCAACTCATGAAACCACCAAACGAT
GAGGAAGATTTCATGCTGATCATGGAGCTTGCCCACAGCTCATTACTTCC
GATGACCATGAAAGCTATCATCGAGCTTGGTGTGTTAGAGATTTTAGCTA
AAGCTAGTCCATCTCAGCTTTCTTCTTCTGAGATTGCATCTCAGCTGCCC
ACAAATAACCAAGAAGCCTCAACAGTGCTTGATCGAATGTTACGACTCCT
TGCTAGTTACTCTTTCCTAACATATAATCTTGTCACAAATAAAGATGGAA
ATGTTTGCGGAGTATATGGTTTAGCGTCCGTTTGCAGATATTTGCTTCCA
AATGAAGACGGAGTTTCTCTTGCTCCCATTTTCCTCTTAGCTCGGGAGAA
AGTTTCTGTAGATCCTTGGTACCACTTGAAAGATTGTTTATTGGAAGGGA
CCCTACCTTTTATGAAGGCACATAATACAAAAAATCCATTTGAGTATGCT
ATGAAAGATGCTAGAAGACGGAACCTCTTCAAAATCATCATGAGCAATCA
TACGGCTTTAGTTATGAAGAAAATCTTGAAAT
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