FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METVS (50S ribosomal protein L3P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl3p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23 Identity = 57/127 (44.88%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI+V G SVA+K+ +A K + I+ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV +TV AGQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METVA (50S ribosomal protein L3P OS=Methanococcus vannielii GN=rpl3p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23 Identity = 57/127 (44.88%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI+V G SVA+K+ +A K + I+ VF+ E ID + VTKGKG++G V RWGV + + +G+ R+ IG W P RV +TV AGQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METKA (50S ribosomal protein L3P OS=Methanopyrus kandleri GN=rpl3p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.006e-22 Identity = 54/127 (42.52%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK +ME ++ G V ++ ++A ++I VF + E++D+ +TKGKG++GVV RWGVT RKT R R + IG P+RV +TV AGQ GYH RTE NK+I K+G+ +E Sbjct: 154 KKAGVPKKKPDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE 280
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METJA (50S ribosomal protein L3P OS=Methanocaldococcus jannaschii GN=rpl3p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K+ L +KK ++EI++ G + +++++A KQ+ I VFQ+ E++D IGVTKGKG++G V RWGV + + +G+ R V IG W P V ++V GQ GYH RTE NK+I K+G E Sbjct: 148 KLTCLPKKKPEILEIRIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE 274
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METTP (50S ribosomal protein L3P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl3p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 365 R + G+ +K +MEI V G SV +++ A G Q+ + +F E ID+ VTKGKG +G V RWG+ RK R LR V +G WHPAR+S+ V + GQ GYH RTE NK+I +G Sbjct: 146 RLLTGVPKKVPDIMEIPVTGRSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLRHVGNLGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAIG 268
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METMP (50S ribosomal protein L3P OS=Methanococcus maripaludis GN=rpl3p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METM7 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl3p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METM6 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl3p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METM5 (50S ribosomal protein L3P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl3p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 52/127 (40.94%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K G+ +KK ++EI++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + + +G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E Sbjct: 147 KTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAIGDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_ARCFU (50S ribosomal protein L3P OS=Archaeoglobus fulgidus GN=rpl3p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21 Identity = 52/124 (41.94%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 15 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 G+ +K +ME ++ GG+V + +D+A K+I + VF + +ID+I VTKGKG++G V RWGV L K R R+V +G W+P V +TV +AGQ G+H RTE NK++ K+G+ +E Sbjct: 148 GVPKKVPDVMEHRI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE 270 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |