FC920380

Overview
NameFC920380
Unique NameFC920380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2223 contig Ccv1_Contig2223:1278..1968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_MUNMU (Cortactin-binding protein 2 OS=Muntiacus muntjak GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LL+ +     VNA D+ G+ P+ +AA+ G+   VE+L++  A++N   DGG+T L+ A   G  + ++LL+  G   + K + G T +H    TGN    +LL+
Sbjct:  735 EDGHSALYSAAKNGHTDCVRLLLNAEAQ---VNAADKNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTDRSVKTRDGWTPIHAAVDTGNVDSLKLLM 856          

HSP 2 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 679
            TLL  AA+ G+  ++ +LL+  E    +N   E+G + ++SAA  G+   V +LL+  A VN  +  G T L  AA++G  K VELLI+  A IN     G T L+     GN    +LL+E G +
Sbjct:  705 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQVNAADKNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTD 828          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_HYLLE (Cortactin-binding protein 2 OS=Hylobates leucogenys GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LLS +     VNA D+ G+ P+ +AA+ G+   VE+L++  A++N   DGG+T L+ A   G  + ++LL+  G   + K   G T +H    TGN    +LL+
Sbjct:  742 EDGHSALYSAAKNGHTDCVRLLLSAEAQ---VNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTNRSVKTTDGWTPVHAAVDTGNVDSLKLLM 863          

HSP 2 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 673
            TLL  AA+ G+  ++ +LL+  E    +N   E+G + ++SAA  G+   V +LLS  A VN  +  G T L  AA++G  + VELLI+  A IN     G T L+     GN    +LL+E G
Sbjct:  712 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLSAEAQVNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAG 833          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: MIB_DROME (E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster GN=mib1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 43/127 (33.86%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            T L  A+  GH EV+++LL     A  V   D++G   +H AA      ++E+L   GAD+N +N   +T+LH A +KG L +V+ L++ G   + +D  G T LH   S  +  +  LL++ GA++
Sbjct:  570 TALQAASQNGHIEVIQVLL---RHAVDVEIEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQDSEGDTPLHDAISKEHDEMLSLLLDFGADI 693          

HSP 2 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 55/172 (31.98%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  176 IDQTIKDKDLFKA---AETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK---INSKDKVGCTALHRGASTGNSALCELLIEEG 673
            +D  I+DKD  +A   A  GD +                RN   +T LH+A + GH  VV+ LL++    ++    D EG  P+H A S  +  ++ +LL  GAD+ L N+ G  ALH+AA KG    +++L+++  +   +  K   G TALH  A   +  + ELL+  G
Sbjct:  592 VDVEIEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNA-RNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQ---DSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHLAALNNHVEIAELLVHMG 759          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_MICMU (Cortactin-binding protein 2 OS=Microcebus murinus GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LL+ +     VNA D+ G+ P+ +AA+ G+   VE+L++  A++N   DGG+T L+ A   G  + ++LL+  G   + K + G T +H    TGN    +LL+
Sbjct:  728 EDGHSALYSAAKNGHTDCVRLLLNAEAQ---VNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLLM 849          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_AOTNA (Cortactin-binding protein 2 OS=Aotus nancymaae GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LLS +     VNA D+ G+ P+ +AA+ G+   VE+L++  A++N   DGG+T L+ A   G  + ++LL+  G   + K   G T +H    TGN    +LL+
Sbjct:  742 EDGHSALYSAAKNGHTDCVRLLLSAEAQ---VNAADKNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTDRSVKTTDGWTPVHAAVDTGNVDSLKLLM 863          

HSP 2 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 679
            TLL  AA+ G+  ++ +LL+  E    +N   E+G + ++SAA  G+   V +LLS  A VN  +  G T L  AA++G  K VELLI+  A IN     G T L+     GN    +LL+E G +
Sbjct:  712 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLSAEAQVNAADKNGFTPLCAAAAQGHFKCVELLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGTD 835          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: TANC2_HUMAN (Protein TANC2 OS=Homo sapiens GN=TANC2 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            T L  AA  G  EV  +LL   E    V   +  G  P+ S    G+  IV++LL+ GADVN+ +  GRT L  AAS+G L  V+ L+++GA I   DK G TAL      G+ ++   L++ GA  D
Sbjct: 1036 TALTAAAGRGKLEVCRLLL---EQGAAVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATD 1160          

HSP 2 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 2
Query:  329 GHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            GH ++V++LL+       VN  D++G  P+  AAS G++  V+ LL++GA + L +  G TAL +A  KG L +V  L+  GA  +  DK G T L   A  G++ + + L++ GA ++
Sbjct: 1078 GHWQIVDLLLTHGAD---VNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGAMIE 1193          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_CALJA (Cortactin-binding protein 2 OS=Callithrix jacchus GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LLS +     VNA D+ G+ P+ +AA+ G+   VE+L++  A++N   DGG+T L+ A   G  + + LL+  G   + K   G T +H    TGN    +LL+
Sbjct:  741 EDGHSALYSAAKNGHTDCVRLLLSAEAQ---VNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECIRLLLEAGTDRSVKTTDGWTPVHAAVDTGNVDSLKLLM 862          

HSP 2 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 679
            TLL  AA+ G+  ++ +LL+  E    +N   E+G + ++SAA  G+   V +LLS  A VN  +  G T L  AA++G  + VELLI+  A IN     G T L+     GN     LL+E G +
Sbjct:  711 TLLQQAAAQGNVTLLSMLLN--EEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLSAEAQVNAADKNGFTPLCAAAAQGHFECVELLIAYDANINHAADGGQTPLYLACKNGNKECIRLLLEAGTD 834          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: RAI14_HUMAN (Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 2
Query:  194 DKDLFKAAETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLS--VDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            D  L +A E GD+                  + + +T  H+AA+ GH E + ++++  VD     V A D  G + +H AA   +   +  LL         +  G+TALHYAA++G L+ V++L    + IN KD  G   L      G+S +C  L++ GA+V++
Sbjct:   20 DDRLLQAVENGDAEKVASLLGKKGASATK-HDSEGKTAFHLAAAKGHVECLRVMITHGVD-----VTAQDTTGHSALHLAAKNSHHECIRKLLQSKCPAESVDSSGKTALHYAAAQGCLQAVQILCEHKSPINLKDLDGNIPLLLAVQNGHSEICHFLLDHGADVNS 180          

HSP 2 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 670
            +T LH AA+ G  + V+IL    E  + +N  D +G  P+  A   G+  I   LL  GADVN +N  GRTAL  A   G    VE LI +GA +N  D +G  ALH    + N+ +  LL+ +
Sbjct:  120 KTALHYAAAQGCLQAVQILC---EHKSPINLKDLDGNIPLLLAVQNGHSEICHFLLDHGADVNSRNKSGRTALMLACEIGSSNAVEALIKKGADLNLVDSLGYNALHYSKLSENAGIQSLLLSK 240          

HSP 3 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  308 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            LH+AA   H E +  LL   +S     +VD  G   +H AA+ G +  V++L    + +NLK+  G   L  A   G  +I   L+  GA +NS++K G TAL      G+S   E LI++GA+++
Sbjct:   90 LHLAAKNSHHECIRKLL---QSKCPAESVDSSGKTALHYAAAQGCLQAVQILCEHKSPINLKDLDGNIPLLLAVQNGHSEICHFLLDHGADVNSRNKSGRTALMLACEIGSSNAVEALIKKGADLN 212          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: FANK1_RAT (Fibronectin type 3 and ankyrin repeat domains 1 protein OS=Rattus norvegicus GN=Fank1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  347 EILLSVDESANV-VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            ++LL + E  +V V+  ++ G+  +  AA  G   +V++L+S G DVNLKN  G+ +L  A   G L +V+ L   GA  +++D  GCTALH  A  G+  + + +I++G EVD
Sbjct:  124 DLLLRILEGGHVMVDVPNKFGFTALMVAAQKGYTRLVKILISNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRKHGASWDARDLGGCTALHWAADGGHCPVIDWMIKDGCEVD 237          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: CTTB2_ATEAB (Cortactin-binding protein 2 OS=Atelerix albiventris GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 41/125 (32.80%), Postives = 71/125 (56.80%), Query Frame = 2
Query:  290 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 664
            +D  + L+ AA  GH + V +LL+       VNA D+ G+ P+ +AA+ G+   +E+L++  A++N   DGG+T L+ A   G  + ++LL+  G+  + K + G T +H    TGN    +LL+
Sbjct:  743 EDGHSALYSAAKNGHTDCVRLLLNAQAQ---VNAADKNGFTPLCAAAAQGHFKCIELLIANDANINHAADGGQTPLYLACKNGNNECIKLLLGAGSDRSVKTRDGWTPVHAAVDTGNVDNLKLLM 864          
The following BLAST results are available for this feature:
BLAST of FC920380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CTTB2_MUNMU1.773e-1333.60Cortactin-binding protein 2 OS=Muntiacus muntjak G... [more]
CTTB2_HYLLE1.773e-1334.40Cortactin-binding protein 2 OS=Hylobates leucogeny... [more]
MIB_DROME2.315e-1333.86E3 ubiquitin-protein ligase mind-bomb OS=Drosophil... [more]
CTTB2_MICMU2.315e-1333.60Cortactin-binding protein 2 OS=Microcebus murinus ... [more]
CTTB2_AOTNA2.315e-1334.40Cortactin-binding protein 2 OS=Aotus nancymaae GN=... [more]
TANC2_HUMAN3.024e-1338.28Protein TANC2 OS=Homo sapiens GN=TANC2 PE=1 SV=3[more]
CTTB2_CALJA3.024e-1334.40Cortactin-binding protein 2 OS=Callithrix jacchus ... [more]
RAI14_HUMAN3.950e-1329.34Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2[more]
FANK1_RAT3.950e-1336.84Fibronectin type 3 and ankyrin repeat domains 1 pr... [more]
CTTB2_ATEAB3.950e-1332.80Cortactin-binding protein 2 OS=Atelerix albiventri... [more]

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Properties
Property NameValue
Genbank descriptionC32007F01EF RVDevelop1 Citrus clementina cDNA clone C32007F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920380 ID=FC920380; Name=FC920380; organism=Citrus clementina; type=EST; length=691bp
GGGGAAGGAGTAAAGTGACGAACCGCGCACCGGGTGAGAACCGGACACAA
CCGAACCGCACCATACCATTGCGCACCGCTTTCGACTTGCAACTAGCTCG
CCGCTGGACCAAATCACACCGTCAAAACTCTAATTCTCGGCAAATTGACA
GTACAATTCCGGTATGGACATGGACATCGATCAAACAATCAAGGACAAAG
ACCTCTTCAAAGCCGCCGAAACTGGAGATTCCTCAACATTCAAATCCCTC
TCAAAACAGCAGCTCTTAAAATCTCTCTCCTTGCGGAACGACGACGACCG
CACCCTCCTCCACGTCGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAA
TATTGTTGAGTGTTGATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAA
GAAGGGTGGGCTCCGATTCATTCTGCGGCTAGCATTGGCAATGTGACAAT
CGTGGAAATGTTGTTAAGCAAAGGAGCTGATGTAAATTTGAAGAATGATG
GTGGGCGAACCGCTCTTCACTATGCTGCCAGCAAGGGATGGTTGAAGATT
GTGGAACTTCTGATCTCACGTGGTGCAAAAATTAACTCCAAGGACAAGGT
TGGTTGCACAGCATTGCACCGGGGAGCTAGTACAGGGAATTCAGCATTGT
GTGAACTCTTAATTGAAGAAGGAGCAGAGGTTGATGCTACT
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