FC920383

Overview
NameFC920383
Unique NameFC920383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:2..580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 6.899e-73
Identity = 129/163 (79.14%), Postives = 144/163 (88.34%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDPY+  PS+  NAPF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI++L+CAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KF   +H   PNPK
Sbjct:    1 MDPYRHRPSSAFNAPFWTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITNLSCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFTRHVHPLKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 3.424e-72
Identity = 128/163 (78.53%), Postives = 143/163 (87.73%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDPYK  PS+ +NAPF TTN GAPV N+  SLT+G RGPVLLEDYHL+EK+A+F RERIPERVVHARG SAKGFFE THDIS+LTCAD  RAPGVQTPVIVRFSTV+HER SPET+RD RGFAVKFYTREGN+DL+GN+ PVFFIRD I+FPDV+HA  PNPK
Sbjct:    1 MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVKFYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.301e-71
Identity = 124/163 (76.07%), Postives = 143/163 (87.73%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVHARGASAKGFFE THD+S L+CAD  RAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AF PNPK
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHARGASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 8.433e-71
Identity = 128/163 (78.53%), Postives = 142/163 (87.12%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDP K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVIVRFSTV+HERGSPE+LRD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDPSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.077e-69
Identity = 124/163 (76.07%), Postives = 137/163 (84.05%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDP K  PS++ +    TTN G PVWNDN +LTVG RGP+LLEDYHL+EK+AHFAR+ IPE  VHA  ASAKGFFECTHD++ LTCAD   +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAF PNPK
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNPGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARD-IPEPFVHAGRASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPK 162
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 4.627e-69
Identity = 126/163 (77.30%), Postives = 140/163 (85.89%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE+LRD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDLSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.043e-69
Identity = 125/163 (76.69%), Postives = 140/163 (85.89%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDLSKYRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFVRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.758e-68
Identity = 124/163 (76.07%), Postives = 139/163 (85.28%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MD  K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDLSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.999e-68
Identity = 123/163 (75.46%), Postives = 139/163 (85.28%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
[Close]
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.999e-68
Identity = 123/163 (75.46%), Postives = 139/163 (85.28%), Query Frame = 3 
Query:   90 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A  PNPK
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPK 163
The following BLAST results are available for this feature:
BLAST of FC920383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_CUCPE6.899e-7379.14Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA3_ARATH3.424e-7278.53Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA2_CUCPE1.301e-7176.07Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA2_NICPL8.433e-7178.53Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA_SECCE2.077e-6976.07Catalase OS=Secale cereale PE=2 SV=1[more]
CATA1_TOBAC4.627e-6977.30Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_CAPAN6.043e-6976.69Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA_SOLME1.758e-6876.07Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_SOLTU2.999e-6875.46Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLLC2.999e-6875.46Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]

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Properties
Property NameValue
Genbank descriptionC32007F04EF RVDevelop1 Citrus clementina cDNA clone C32007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920383 ID=FC920383; Name=FC920383; organism=Citrus clementina; type=EST; length=579bp
GACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATA
ATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTA
CAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATG
CCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGA
GGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTT
TGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTG
CTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCT
GATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTC
CACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAG
GATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGT
AACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGT
GATCCATGCTTTCTAACCTAATCCAAAGT
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