FC920383

Overview
NameFC920383
Unique NameFC920383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length579
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:2..580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 2.235e-47
Identity = 87/147 (59.18%), Postives = 114/147 (77.55%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT+ GAP+++    LT G RGP+L++D   ++++AHF RERIPERVVHA+GA A G+FE THDI+    AD+F   G QTP++VRFSTV  E GS +T+RDPRGF++KFYT EGNWDL+GN+ P+FFIRDAI FP+ IHA   NP+
Sbjct:   23 ITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQ 169          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 3.812e-47
Identity = 90/150 (60.00%), Postives = 108/150 (72.00%), Query Frame = 3
Query:  126 NAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            + P +TT  G PV +D +SL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFFE    ++  T ADLF+ PG +TP  VRFSTV   +GS +  RD RGFAVK YT+EGNWDL+GN+IPVFFI+DAIKFPDVIH+  P P
Sbjct:   36 DTPVLTTAQGGPVADDQNSLRAGERGPTLIEDFHFREKIFHFDHERIPERVVHARGYGVHGFFETYESLAAYTRADLFQRPGERTPAFVRFSTVAGSKGSFDLARDVRGFAVKIYTKEGNWDLVGNNIPVFFIQDAIKFPDVIHSVKPEP 185          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.502e-47
Identity = 92/151 (60.93%), Postives = 112/151 (74.17%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECT-----HDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            +TT  G PV ++ +S TVGSRGP+ LE+Y  +EKL+HF RERIPERVVHARG  A G F  T       +S  T A LF+  G +TPV VRFSTV H   SPETLRDPRGFAVKFYT +GNWDL+GN++ +FFIRDA+KFPD+IH+  P+P
Sbjct:   33 LTTRQGHPVHDNQNSRTVGSRGPMTLENYQFIEKLSHFDRERIPERVVHARGVGAHGVFRATGKVGDEPVSKYTRAKLFQEDGKETPVFVRFSTVGHGTHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKIFFIRDALKFPDLIHSQKPSP 183          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 1.892e-46
Identity = 89/153 (58.17%), Postives = 108/153 (70.59%), Query Frame = 3
Query:  117 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNP 575
            T ++   MTTN G  V  D HSL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFF+    ++  T A   + P V+TPV VRFSTV   +GS +T+RD RGFA KFYT EGN+DL+GN+IPVFFI+DAIKFPD++HAF P P
Sbjct:   23 TDNSGKKMTTNQGLRVSEDEHSLKAGVRGPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEP 175          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.227e-46
Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 3
Query:  108 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            L S +  A  +T + GAPV ++ +S T G  G VLL+D  L++KL  F RERIPERVVHARG  A G F  + DIS L+ A +FR  G +TPV VRFS V+H   SPETLRDPRGFA KFYT +GNWDL+GN+ P FFIRDAIKFPD++HAF P+P+
Sbjct:   23 LLSLSVQAATLTRDNGAPVGDNQNSQTAGPNGSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDLSMAKVFRK-GEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPR 178          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.227e-46
Identity = 90/147 (61.22%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH    +PK
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPK 155          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.227e-46
Identity = 90/147 (61.22%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH    +PK
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPK 155          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.227e-46
Identity = 90/147 (61.22%), Postives = 110/147 (74.83%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT AGAPV ++N+++T G RGP LL+D   +EKLAHF RERIPERVVHA+G+ A G F  THDIS  T A +F   G QTP+ +RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH    +PK
Sbjct:    9 LTTAAGAPVADNNNTMTAGPRGPALLQDVWFLEKLAHFDRERIPERVVHAKGSGAYGTFTVTHDISRYTRARIFAEVGKQTPLFLRFSTVAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPK 155          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 3.227e-46
Identity = 86/147 (58.50%), Postives = 111/147 (75.51%), Query Frame = 3
Query:  138 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            +TT+ GAP+++    LT G RGP+L++D   ++++AHF RERIPERVVHA+GA A G+FE THDIS    AD+F   G QTP+++RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH    NP+
Sbjct:   23 ITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDRERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQ 169          
BLAST of FC920383 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 7.189e-46
Identity = 89/154 (57.79%), Postives = 115/154 (74.68%), Query Frame = 3
Query:  117 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAF*PNPK 578
            T +    +T + GA V ++ +S T G++GPVLL+D  L++KL  F RERIPERVVHARG   KG F  + DIS L+ A +F++ G +TPV VRFS+V+H   SPETLRDP GFA KFYT +GNWDL+GN+ P FFIRDAIKFPD++HAF P+P+
Sbjct:   23 TVYATDTLTRDNGAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADISDLSKATVFKS-GEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPR 175          
The following BLAST results are available for this feature:
BLAST of FC920383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_CAEEL2.235e-4759.18Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATE_RHIME3.812e-4760.00Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_DEIRA6.502e-4760.93Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATE_BACSU1.892e-4658.17Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]
CATB_PSEAE3.227e-4659.24Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_BORPE3.227e-4661.22Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA3.227e-4661.22Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR3.227e-4661.22Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA1_CAEEL3.227e-4658.50Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATB_PSESY7.189e-4657.79Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]

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Properties
Property NameValue
Genbank descriptionC32007F04EF RVDevelop1 Citrus clementina cDNA clone C32007F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920383 ID=FC920383; Name=FC920383; organism=Citrus clementina; type=EST; length=579bp
GACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATA
ATAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTA
CAAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATG
CCGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGA
GGTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTT
TGCCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTG
CTAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCT
GATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTC
CACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAG
GATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGT
AACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGT
GATCCATGCTTTCTAACCTAATCCAAAGT
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