FC920387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 60/161 (37.27%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 83 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGI I A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 60/161 (37.27%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 83 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 MGKEK H+NI IGH+D GK+T T + K A + + F +DK E+ERGI I A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTAAIT---------------KTAGLLGQGKFIAYDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 95 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGI I+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK D Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTR (Elongation factor Tu OS=Chlamydia trachomatis GN=tuf PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 + K HINI IGHVD GK+T T + L G F+ +D E+ RGI I+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+ L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLADFRDYSSIDNTPEEKARGITINASHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISEEDAEL-VDLVEMELVELLEEKGY 165
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHLTA (Elongation factor Tu OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 + K HINI IGHVD GK+T T + L G F+ +D E+ RGI I+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+ L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLADFRDYSSIDNTPEEKARGITINASHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISEEDAEL-VDLVEMELVELLEEKGY 165
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHLFF (Elongation factor Tu OS=Chlamydophila felis (strain Fe/C-56) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 61/181 (33.70%), Postives = 94/181 (51.93%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 + K HINI IGHVD GK+T T + L +AE Y+ + D E+ RGI I+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRAL--------------SAEGLANFCDYSSI-DNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISQEDAEL-VDLVEMELSELLEEKGY 165
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU_CHLCV (Elongation factor Tu OS=Chlamydophila caviae GN=tuf PE=3 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 61/181 (33.70%), Postives = 94/181 (51.93%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 631 + K HINI IGHVD GK+T T + L +AE Y+ + D E+ RGI I+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRAL--------------SAEGLANFCDYSSI-DNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISQEDAEL-VDLVEMELSELLEEKGY 165
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: EFTU2_CARHZ (Elongation factor Tu 2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 58/152 (38.16%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 95 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 K H+NI IGHVD GK+T T + L K+ KR + +D ERERGI I+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTVLA-----------KKGLAQQKRYDE----IDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKAD 139
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_SHIDS (Sulfate adenylyltransferase subunit 1 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysN PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 59/185 (31.89%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYTP 637 + K+ + + G VD GKST G L++ I + + ++ + K A ++D L+AERE+GI ID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ YL G P Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLM--DYSEETFTRIRED---YLTFAGQLP 195
BLAST of FC920387 vs. ExPASy Swiss-Prot
Match: CYSN_SALAR (Sulfate adenylyltransferase subunit 1 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysN PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.529e-19 Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 89 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGIAIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 550 + K+ + + G VD GKST G L++ I + + ++ + K A ++D L+AERE+GI ID+A F T K + D PGH + +NM TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMD 171 The following BLAST results are available for this feature:
BLAST of FC920387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920387 ID=FC920387; Name=FC920387; organism=Citrus clementina; type=EST; length=672bpback to top |