FC920485

Overview
NameFC920485
Unique NameFC920485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:17..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33
Identity = 78/191 (40.84%), Postives = 109/191 (57.07%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPAL 704
            ++Y  TCPQA+ I+   VK      +    + LR  FHDC V+ CD S+LLDS  K  +EK+   +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A I  + LP    ++S + + F   G+    LVAL G H++G  HC    +RL+      EVDP L
Sbjct:   26 HYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA-IETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTL 215          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---------PEVDPAL 704
            L   FY ++CP AE I++  V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+          P +DP L
Sbjct:   23 LKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTL 220          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLY 206          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32
Identity = 78/201 (38.81%), Postives = 117/201 (58.21%), Query Frame = 3
Query:  123 EEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPAL 704
            E +  L  N+Y  TCP  E I+K+ V   +K+   TA + LR  FHDC V+ CDAS+ + S  +  +EK+ D  +S     F  +   K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +  +RL     +  VDP +
Sbjct:   27 ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENED-AEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTM 226          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32
Identity = 73/183 (39.89%), Postives = 100/183 (54.64%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L   +Y  +CPQ  +I++  V     R    A S LR  FHDC VQ CD SLLLDS+ +  +EK  +  S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY
Sbjct:   30 LFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLY 212          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32
Identity = 74/183 (40.44%), Postives = 103/183 (56.28%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L   FY  +CP+A++I++  V   ++       S LR  FHDC V+ CDAS+LLDS+   +SEK  + +    R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLY 215          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 78/184 (42.39%), Postives = 110/184 (59.78%), Query Frame = 3
Query:  138 LVMNFYK--DTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L  ++YK  +TC  AE+ ++ QV++ YK  K+ A   LR ++ DC V  CDAS+LL+      SEK   ++ G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY
Sbjct:   35 LTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLY 213          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL 680
            GL M +Y  +CP AE I+K  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL 205          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32
Identity = 77/183 (42.08%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            GL + FY  TCPQ E I+K+ V     +        LR  FHDC V+ CD S+LLD       EK    +  +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL GP   ++TGRRDGR S   I E  LP   D+++ ++  F + G++   LV L G H++G  HC  L +RLY
Sbjct:   25 GLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQ-GEKSAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS--NINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLY 204          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32
Identity = 75/183 (40.98%), Postives = 103/183 (56.28%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L   FY +TCP A + I+  V+      +  A S +R  FHDC VQ CDAS+LLD T    SEK    + G  R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIY 211          
The following BLAST results are available for this feature:
BLAST of FC920485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER64_ARATH6.061e-3340.84Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER28_ARATH7.916e-3340.40Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER3_ARATH1.034e-3240.11Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER55_ARATH1.350e-3238.81Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER49_ARATH1.350e-3239.89Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER72_ARATH1.764e-3240.44Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER26_ARATH2.303e-3242.39Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH3.008e-3238.46Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER27_ARATH3.008e-3242.08Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PERX_NICSY6.701e-3240.98Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]

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Properties
Property NameValue
Genbank descriptionC32009A06EF RVDevelop1 Citrus clementina cDNA clone C32009A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920485 ID=FC920485; Name=FC920485; organism=Citrus clementina; type=EST; length=705bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGACAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGA
AGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGA
TCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCA
TTGACGCCCCTGGACTTGTTGCACTGCTAGGATCTCACAGTGTTGGCAGA
ACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGC
ACTGA
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