FC920485

Overview
NameFC920485
Unique NameFC920485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:17..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 3.221e-26
Identity = 69/190 (36.32%), Postives = 102/190 (53.68%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPAL 704
            L   FY +TCP AE I+++ V+         A   LR  FHDC V+ CD S+L+        E+    + G+  F  I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +
Sbjct:   24 LQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGND-DERFAAGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTI 210          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26
Identity = 69/186 (37.10%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 695
            L   FY  +CP A   I+  V    ++      S LR  FHDC V+ CDASLLL+ T    S+   + +   R F  + +IK  VE  CPG+VSCADIL ++ RDGVVALGGP   +  GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y + +
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGP-NLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN 214          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPAL 704
            NFY  +CP  E I++  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG  S A  +   LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +
Sbjct:   30 NFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTV 224          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 66/192 (34.38%), Postives = 107/192 (55.73%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPAL 704
            FY+++CP  E I++  V+  +++   TA + LR  FHDC V+ CDAS+++ S  +   +   D S     F  +   K+AV+    C   VSCADIL L+ R+ VV  GGP  P++ GRRDGR S    ++  LP    +++ +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++
Sbjct:   31 FYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSER--DHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSI 220          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 683
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+       +R F  I+ +K A+ER CP  VSCADI+ ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++ P  LVAL G H+ G+  C  +  RLY
Sbjct:   34 DFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLY 214          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26
Identity = 68/184 (36.96%), Postives = 97/184 (52.72%), Query Frame = 3
Query:  135 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLY 683
            G  + FY  TCP AE I++  V   +      A   LR   HDC VQ CD S+LL       SE+    +  +  F  I++ K  +E  CPGVVSCADIL L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++   +F+A  ++   LV L+ G H++G   C  + +R++
Sbjct:   24 GTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPN---SERTAGANVNLHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIF 203          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26
Identity = 66/181 (36.46%), Postives = 103/181 (56.91%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 683
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K ++ER CP  VSCAD+L ++ +  V+  GGP+ P+  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H+ GR  C  +  RLY
Sbjct:   34 DFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLY 214          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L   FY  TCP    I++  +    +         +R  FHDC V  CD S+LLD T  T +EK+   + G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF 204          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L  +FY  TCP    I +  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+ ++  +F+   +D   LVAL G+H+ GR  C  + +RL+
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLH 209          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 69/195 (35.38%), Postives = 103/195 (52.82%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPAL 704
            +FY  TCP  E I++  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +
Sbjct:   30 DFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTI 224          
The following BLAST results are available for this feature:
BLAST of FC920485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER13_ARATH3.221e-2636.32Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER66_MAIZE5.495e-2637.10Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER50_ARATH7.177e-2634.36Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER45_ARATH7.177e-2634.38Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER23_ARATH7.177e-2636.46Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER62_ARATH9.373e-2636.96Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER3_ARMRU9.373e-2636.46Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERX_TOBAC1.224e-2535.71Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER58_ARATH1.224e-2536.22Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER51_ARATH1.224e-2535.38Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32009A06EF RVDevelop1 Citrus clementina cDNA clone C32009A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920485 ID=FC920485; Name=FC920485; organism=Citrus clementina; type=EST; length=705bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGACAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGA
AGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGA
TCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCA
TTGACGCCCCTGGACTTGTTGCACTGCTAGGATCTCACAGTGTTGGCAGA
ACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGC
ACTGA
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