FC920485

Overview
NameFC920485
Unique NameFC920485
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:17..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28
Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L + FY+ +C  AE I+K++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+   +   +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDGR S A      LP    ++  + + F+  G+    +V L G+H++GR+HC    +RLY
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLY 243          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28
Identity = 70/178 (39.33%), Postives = 97/178 (54.49%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRL 680
            FY  +CP+AE I+   V   ++  K+   ++LR  FHDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG +S     +  LP     +S  ++ FAA G++   +V L+ G HSVG  HC     RL
Sbjct:   26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28
Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 3
Query:  150 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            +Y  +CP+AE I++  V+  +      +   LR  FHDC VQ CD S+L+       +E+    + G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+   +RLY
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLY 206          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28
Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            L  ++Y   CPQ E ++       +K    +A + +R  FHDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY
Sbjct:   42 LSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLY 227          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 63/174 (36.21%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 659
            L  NFY  +C  AE +++  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G +HC
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHC 199          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 69/181 (38.12%), Postives = 100/181 (55.25%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY 683
            +FY  TCPQ  DI    +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY
Sbjct:   27 SFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLY 207          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 70/180 (38.89%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  147 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 683
            + Y  +CP    I+++QV +  K     A S +R  FHDC V  CDASLLLD      SEK  +      R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+
Sbjct:   33 DIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLF 208          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27
Identity = 68/187 (36.36%), Postives = 102/187 (54.55%), Query Frame = 3
Query:  129 DPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 683
            D  L   FY  +CP   +I+++ +    +       S LR  FHDC V  CDAS+LLD+T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY
Sbjct:   27 DAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLY 213          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 69/188 (36.70%), Postives = 105/188 (55.85%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 695
            L  ++Y  TCP+ E+ + + V         TA   LR  FHDC V  CDAS+L+ ST +  SE++ D  RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSD 209          
BLAST of FC920485 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 3
Query:  138 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY 683
            L   FY ++CP   +I+++ +    +   + A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLY 194          
The following BLAST results are available for this feature:
BLAST of FC920485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER5_VITVI5.871e-2837.16Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER44_ARATH5.871e-2839.33Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER25_ARATH5.871e-2839.33Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER19_ARATH5.871e-2835.48Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER46_ARATH1.001e-2736.21Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER37_ARATH1.001e-2738.12Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER59_ARATH2.231e-2738.89Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER1B_ARMRU2.231e-2736.36Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER6_ARATH2.914e-2736.70Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER1C_ARMRU2.914e-2736.41Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]

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Properties
Property NameValue
Genbank descriptionC32009A06EF RVDevelop1 Citrus clementina cDNA clone C32009A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920485 ID=FC920485; Name=FC920485; organism=Citrus clementina; type=EST; length=705bp
GAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGACAATGGGTACG
AAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCT
GAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATT
TTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAACAAGTT
AAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAA
CATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGG
ACTCGACAAGAAAGACCTTGTCTGAGAAGGAAATGGACAGGAGCTTTGGT
ATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGA
GTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCGGTAGAG
ATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGA
AGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGA
TCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCA
TTGACGCCCCTGGACTTGTTGCACTGCTAGGATCTCACAGTGTTGGCAGA
ACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGC
ACTGA
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