FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.686e-23 Identity = 56/184 (30.43%), Postives = 102/184 (55.43%), Query Frame = 1 Query: 175 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQ---------NNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 D++ + K L+ + + + + E ++++ + ++++ +P ++ +E++D +V ++T ++ ++ + L+P V +++ S ++D LPPE DS + + EKP Y+DIGG D Q QE+ EAV LP+TH E ++ IGI PP+GVL+YGPPGTGK Sbjct: 32 DEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQPSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGK 215
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 262 NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 N + LLR EE++ +Q +G+ ++ + +N +V Y V I I+ + +KP+ VAL S L+ +LP + D +SL+ + PD TY +GG + Q +EI+E +ELP+ H EL++ +GI P+G+LLYGPPGTGK Sbjct: 49 NARVRLLR--EEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGK 192
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 244 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 ++ ++ L R + +EE+ +Q +G +E + + +V + Y V++ +N + LK VAL S + +LP + D +SL+ + PD TY IGG D Q +EIRE +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 92 LEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGK 243
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 60/171 (35.09%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 223 IDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 I +E ++D+ +NL+R L+AQ EE++++Q +G+ ++++ + ++ + Y V I +I + L P VAL S AL +LP + D +SL+ + PD TY +GG D Q +EI+E +ELP+ H EL++ +GI P+GV++YGPPGTGK Sbjct: 35 IQEKEIVLRDKIENLRR--LQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGK 203
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 259 KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR-ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 K LK++ + ++ +K IQ + +IG+ + +D+ IV + G Y VR + ++ LL P A V L + ++ +LP E D I ++ V+Y +IGG Q +E+RE VELPL EL+ ++GI P+GVLLYGPPGTGK Sbjct: 37 KKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGK 184
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 68/196 (34.69%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 139 TRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEY------VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREL---LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 T D+ + D +L++L+ QL ++ + E E +++L R E K+++ PL I E+ D+ G V G+N L+ + EL L+P + VA++ +S ++V L EAD ++ + PDV Y DIGG D Q +E+RE VELP+ L++ +GI+PP GVLL+GPPGTGK Sbjct: 6 TVEDVELPYDDSASQQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDE--GAVIKQHGNNQ--EALTEVTDELRATLEPGSRVAVN-NSLSVVRQLDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGK 196
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |