FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + EKP+VTY+++GG +EQI+++REVVELP+ PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.143e-14 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 412 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLGI PP+ Sbjct: 120 VVGL---VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPK 205
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.361e-14 Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 370 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D + ++ VV + + I+ G+ V +++ I LP K DP V M + E+P+VTY+++GG +EQI ++REVVELP+ +PE F ++G++PP+ Sbjct: 67 DGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPK 169
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.361e-14 Identity = 58/208 (27.88%), Postives = 97/208 (46.63%), Query Frame = 1 Query: 124 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQ---MMQEEQPLQVARCTKIISPNSED------AKYVINVKQIAKFVV--------------GLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 D+D +A + T + + + + +KD ++ N L S + + + Q + ++ P V +I+ N ED A ++ ++ K VV GL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H ++F KLGI PP+ Sbjct: 18 DDDQLASMSTEDIVRATRLLDNETRVLKDELQRTN-----------LEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGL---VDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPK 211
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.001e-14 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 412 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 VVGL V P +++ G VGV+++ Y I LP + D V M V+EKP Y+D+GG ++QI+++ E + LPM H E+F KLG+ PP+ Sbjct: 120 VVGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPK 205
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.144e-14 Identity = 37/119 (31.09%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 322 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 PL + + +++ N+ ++ + + V + ++ ++ V + R+ + LPP+ D S+++++ EKPDV+YND+GGC Q +++RE VELP+ H E + ++GIDPPR Sbjct: 76 PLVIGQFMEMVDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPR 190
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.560e-13 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 322 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 PL V T II + + V+ +F+V + V+PT ++ G+R +++ I LP D V M + + P TY D+GG ++QI ++RE VELPM P+ F K+GI+PP+ Sbjct: 74 PLIVGTITDII----DSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPK 188
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 35/104 (33.65%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 367 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 ++ + ++ ++VVG KV + G RV +D I LP ++DP V M E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PP+ Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPK 174 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |