FC920672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 505 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPPR Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPR 200
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 505 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPPR Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPR 200
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 505 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPPR Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPR 200
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 505 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPPR Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPR 200
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 427 DKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 DK+ P D+ VGV+++ Y I LP + D V M V+EKP TY+DVGG +QIE++ E + LPM +KF +GI P+ Sbjct: 138 DKLKPNDL-----VGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPK 216
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 322 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 PL + + + I N+ ++ + +VV + + ++ V + R+ + LPP+ D S+ M+ EKPDVTY DVGG Q +++RE VELP+ + + ++GIDPPR Sbjct: 87 PLVIGQFMEAIDQNTG----IVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPR 201
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 45/158 (28.48%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 217 KKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQ----PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 KK+ L ++++ L P + S+ Q EQ PL V + + +D +I ++ V + V +E G V ++ + L ++DP V +M +E+ P TY D+GG +EQI++++E VELP+ +PE + ++GI PP+ Sbjct: 51 KKLAHLLSLEDNILSLCEPDKSSEGSNSQKHVVEQLRGSPLSVGTLEEFV----DDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPK 204
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11 Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 322 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 P+ V +II N +++ ++ V + V +E G V ++ + + L DP VT+M +E+ P TY D+GG QI++++E VELP+ HPE + ++GI PP+ Sbjct: 105 PMSVGNLEEIIDDNHA----IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPK 219
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 505 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 LPP D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPPR Sbjct: 143 LPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPR 200
BLAST of FC920672 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 403 AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPR 678 + FVV + V ++ V + R+ I LPP++D ++ +M EKP VTY DVGG Q ++++E VELP+L + + ++GIDPP+ Sbjct: 78 SNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQ 169 The following BLAST results are available for this feature:
BLAST of FC920672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920672 ID=FC920672; Name=FC920672; organism=Citrus clementina; type=EST; length=748bpback to top |