FC923106

Overview
NameFC923106
Unique NameFC923106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14386 contig Ccv1_Contig14386:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 4.410e-75
Identity = 130/191 (68.06%), Postives = 154/191 (80.63%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII L K+NG ER+ATMEMI DACENWGFFELVNHGI  E++DTV+++TK HY KCM+QRFK++VASK LE VQ+EV D+DWESTFFL+HLP+SN++E+PDL+++YR+ M++FA  LEK+A                  K  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 4.410e-75
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 5.751e-75
Identity = 132/191 (69.11%), Postives = 154/191 (80.63%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L  LNG+ R ATME I DACENWGFFELV+HGI  E LDTV+RLTKEHY +C++QRFK++VASKGLEAV++EVND+DWESTF+LRHLP SN++E+PDLED YR  MKEFA++LEK+A                  KK FYG+ GPTFGTKVSNYPPCP P+LIKGLRAHTDAGG+ILLFQ  K
Sbjct:    1 MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 5.751e-75
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.276e-74
Identity = 132/191 (69.11%), Postives = 151/191 (79.06%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            MENFPII+L KLNG ER ATME INDACENWGFFELVNHGI HE++DTV++LTK HY KCM+QRFK++VA KGLE V+ EV D+DWESTFFLRHLP SN++++PDL+D YR+ M++F   LEK+A                  K  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.276e-74
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.068e-73
Identity = 126/191 (65.97%), Postives = 155/191 (81.15%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            ME+FP+I++ K+NG+ER+ATM +INDACENWGFFELVNHGI  EL+DTV+R+TK HY KCM+QRFK++VASK LE +Q+EV D+DWEST+FLRHLP SN++E+PDL+++YR+ MK+FA  LEK+A                  KK FYG+KGP FGTKV+NYPPCPK DLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 1.068e-73
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 6.854e-73
Identity = 125/191 (65.45%), Postives = 156/191 (81.68%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            ME+FPII+L KLNG+ER+ TME I DACENWGFFE VNHGIS ELLD V+++TKEHY KCM++RFK+ + ++GL++++SEVND+DWESTF+L+HLPVSN++++PDL+DDYR  MK+FA ++EK++                  KKVFYGSK PTFGTKVSNYPPCP PDL+KGLRAHTDAGGIILLFQ  K
Sbjct:    1 MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 6.854e-73
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 4.017e-70
Identity = 123/191 (64.40%), Postives = 148/191 (77.49%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            M  FPII+L  +N D R+  +E I DAC+NWGFFELVNHGI HE LD V+++T++HY KCM++RFK+ V SKGLEA Q+EVND+DWESTFFLRHLP SN++++ DL+++Y+K MKEFA +LE +A                  KK FYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    1 MAVFPIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 191          

HSP 2 Score: 22.7126 bits (47), Expect = 4.017e-70
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  185 LLFQDDKVSGLQLL 198          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.350e-67
Identity = 118/192 (61.46%), Postives = 145/192 (75.52%), Query Frame = 3
Query:   93 NFPIIDLSKLN---GDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            NFPIID+ KLN   G ERS  ++ I DAC NWGFF++VNH +SHEL+D V+R+TKEHY K  +Q+FK MV +KGL + +S+VND+DWESTF+LRH P SN++E+PDL+D YRK MKEFA ++E+++                  K  FYG+ GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    6 NFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 197          

HSP 2 Score: 22.7126 bits (47), Expect = 2.350e-67
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  191 LLFQDDKVSGLQLL 204          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.947e-66
Identity = 115/188 (61.17%), Postives = 143/188 (76.06%), Query Frame = 3
Query:   96 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            FP++DLSKL G+ER  TM +INDACENWGFFE+VNHG+ H+L+D  +++TKEHY   M+Q+F  M+ SKGLE ++ EV D+DWESTF+LRHLP SN+ +IPD+ D+YR AMK+F   LE +A                  KKVF+G+KGPTFGTKVSNYP CPKP++IKGLRAHTDAGGIILLFQ  K
Sbjct:    7 FPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDK 194          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 119/190 (62.63%), Postives = 147/190 (77.37%), Query Frame = 3
Query:   87 MENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            M++FP+I++ KL G ER+ATM++INDACENWGFFELVNH I  EL+D V+RLTKEHY KCM+QRFK+++ASK +E    + ND+DWESTFF+RHLPVSN++EIPDL D++RK MKEFA +LEK+A                  K  F G+    PTFGTKVSNYPPCP+P+L KGLRAHTDAGG+ILLFQ
Sbjct:    1 MDSFPVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMASK-VEGAVVDANDMDWESTFFIRHLPVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQ 189          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 1.616e-59
Identity = 114/192 (59.38%), Postives = 142/192 (73.96%), Query Frame = 3
Query:   93 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQS-EVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            +FP+I++  L G +R A M ++ DACENWGFFEL+NHGISHEL++ V+ + KEHY +  +QRFK+  ASK L++V++ + ++LDWESTFFLRHLP SN+++IPDL+DD R  MKEFA ELEK+A                  K+VF G     PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ  K
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEF-ASKTLDSVENVDPDNLDWESTFFLRHLPTSNISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDK 195          

HSP 2 Score: 22.7126 bits (47), Expect = 1.616e-59
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  189 LLFQDDKVSGLQLL 202          
The following BLAST results are available for this feature:
BLAST of FC923106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ACCO1_PETHY4.410e-7568.061-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PRUMU5.751e-7569.111-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO2_SOLLC1.276e-7469.111-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_DIOKA1.068e-7365.971-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_ARATH6.854e-7365.451-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO1_CUCME4.017e-7064.401-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO_DIACA2.350e-6761.46Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_BRAJU2.947e-6661.171-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO_PERAE1.910e-6562.631-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_DORSP1.616e-5959.381-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionC31701B07EF StrClemenN Citrus clementina cDNA clone C31701B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923106 ID=FC923106; Name=FC923106; organism=Citrus clementina; type=EST; length=679bp
GGACGCAGACACAACCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAGA
AGGGAGATTGTGGGAGTTAAGAAACAACAAATAACAATGGAGAATTTTCC
AATTATTGACTTGTCAAAGCTCAATGGTGATGAGAGAAGTGCTACCATGG
AAATGATCAATGATGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGAAT
CATGGGATATCACATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAGGA
GCATTACGGGAAGTGTATGGACCAAAGATTCAAGCAAATGGTGGCAAGCA
AGGGCCTTGAAGCTGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAAGC
ACTTTCTTCTTGCGCCACCTTCCTGTTTCAAACATGGCTGAAATCCCCGA
TCTTGAAGATGATTACAGGAAGGCAATGAAGGAATTTGCCGTTGAATTGG
AGAAGGTTGCTGAGCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGCTG
GAGGAAGGGTATTTGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACCTT
TGGCACCAAGGTCAGCAATTACCCTCCATGCCCAAAACCAGATCTGATCA
AGGGACTTAGGGCCCATACTGATGCTGGTGGCATCATCTTGCTCTTTCAG
ATGACGAAGTCAGTGGCCTCCAGCTGCTC
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