FC923106

Overview
NameFC923106
Unique NameFC923106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14386 contig Ccv1_Contig14386:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.759e-58
Identity = 112/192 (58.33%), Postives = 139/192 (72.40%), Query Frame = 3
Query:   93 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQS-EVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            +FP+I++  L G +R A M ++ DACENWG +EL+NHGISHEL++ V+ + KEHY +  +QRFK+  ASK L+ V++ E  +LDWESTFFLRHLP SN+++IPDL+DD R  MKEFA+ELE +A                  KKVF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQ  K
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEF-ASKTLDTVENVEPENLDWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDK 195          

HSP 2 Score: 22.7126 bits (47), Expect = 1.759e-58
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD+VSGLQLL
Sbjct:  189 LLFQDDKVSGLQLL 202          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.266e-57
Identity = 110/189 (58.20%), Postives = 137/189 (72.49%), Query Frame = 3
Query:   96 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVN---DLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL+KGLRAHTDAGGIILLFQ
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQ 194          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.241e-56
Identity = 109/189 (57.67%), Postives = 137/189 (72.49%), Query Frame = 3
Query:   96 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVN---DLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL++GLRAHTDAGGIILLFQ
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQ 194          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.735e-49
Identity = 99/183 (54.10%), Postives = 121/183 (66.12%), Query Frame = 3
Query:  120 LNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYG----KCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            L G  RS  M ++ DACENWGFFEL+NHGISHE  +  + + KEHY     +  +QRFK+  A         + ++LDWESTFFLRHLP SN++++PDL++D    MKEFA+ LEK+A                  K+VF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQ
Sbjct:    4 LEGSRRSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQ 186          

HSP 2 Score: 21.9422 bits (45), Expect = 3.735e-49
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 2
Query:  638 LALSDDEVSGLQLL 679
            L   DD VSGLQLL
Sbjct:  183 LLFQDDTVSGLQLL 196          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35
Identity = 83/191 (43.46%), Postives = 114/191 (59.69%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            P+ID SKL+G ER+ TM  I + CE WGFF+LVNHGI  ELL+ V++++ E Y K  ++RF+     Q++ +   E     ++++DWE  F L+     +  E P    D+ + MKE+  E+ K+A                  KK F G     P FGTKVS+YPPCP+ DL+KGLRAHTDAGG+ILLFQ
Sbjct:    4 PVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY-KLREERFEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQ-----DDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQ 188          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17
Identity = 59/193 (30.57%), Postives = 97/193 (50.26%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            P+ID+S ++ DE     E++ +A + WG F+++NHGI  E+++ +Q++ KE + + + Q  K+++A K G ++++     L         W    F +  P S  N    P     YR+A +E+A  L KVA                   +   GS+   +  K++ YPPCP+PDL  G+ AHTD   I LL
Sbjct:   58 PVIDISNVDDDEEKLVKEIV-EASKEWGIFQVINHGIPDEVIENLQKVGKEFFEE-VPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAA-GSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLL 247          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.361e-17
Identity = 56/193 (29.02%), Postives = 92/193 (47.67%), Query Frame = 3
Query:   99 PIIDLSKL-NGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAE--IPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQM 653
            PIID+ +L +     + +E ++ AC+ WGFF+LVNHGI    LD V+   ++ +   M+++ K       +   G   V SE   LDW   FF    PV        P L   +R  ++ ++ E++ VA                  +K+F          +++ YPPCP+PD + GL  H+D+ G+ +L Q+
Sbjct:   54 PIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLF-DDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQV 245          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15
Identity = 53/194 (27.32%), Postives = 86/194 (44.33%), Query Frame = 3
Query:   99 PIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQ-------MVASKGLEAVQSEVNDLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            P IDL ++  D    R+   E +  A  +WG   LVNHGIS EL+D V++  K  +   ++Q+ K         +   G +   +    L+WE  FF    P    +++  P    DY +A  E+A +L ++A                  +K   G +      K++ YP CP+P+L  G+ AHTD   +  +
Sbjct:   52 PTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 245          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.999e-15
Identity = 54/193 (27.98%), Postives = 87/193 (45.08%), Query Frame = 3
Query:   93 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            + P+I L+ ++G++R      I +ACE+WG F++V+HG+  +L+  + RL +E +    ++  RF      KG   V S +      DW    T+F       +    PD  + + K  +E++ +L  +A                   K             V+ YP CP+PDL  GL+ HTD G I LL Q
Sbjct:   40 DIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ 229          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.175e-14
Identity = 63/212 (29.72%), Postives = 95/212 (44.81%), Query Frame = 3
Query:   42 RVRREIVGVKKQQITMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVAS-KGLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            R   E   V   Q  +   P+IDL   N  E +  +E+I +A   WG F++VNHGI  + +  +Q++ KE +   + Q+ K+++A  +G + V+     L         W    F    P S  N    P+    YR+A +E+AV L  V                   KK   G     +  K++ YPPCP+PDL  G+ AHTD   I +L
Sbjct:   25 RSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENL-VELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFE--LPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKAS-GGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITIL 232          
The following BLAST results are available for this feature:
BLAST of FC923106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ACCO1_DORSP1.759e-5858.331-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_ORYSI4.266e-5758.201-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ1.241e-5657.671-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_DENCR3.735e-4954.101-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO_MUSAC2.691e-3543.461-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
FLS_SOLTU2.530e-1730.57Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
SRG1_ARATH7.361e-1729.02Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
LDOX_MALDO5.276e-1527.32Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FL3H_DIACA8.999e-1527.98Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FLS_PETCR1.175e-1429.72Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

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Properties
Property NameValue
Genbank descriptionC31701B07EF StrClemenN Citrus clementina cDNA clone C31701B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923106 ID=FC923106; Name=FC923106; organism=Citrus clementina; type=EST; length=679bp
GGACGCAGACACAACCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAGA
AGGGAGATTGTGGGAGTTAAGAAACAACAAATAACAATGGAGAATTTTCC
AATTATTGACTTGTCAAAGCTCAATGGTGATGAGAGAAGTGCTACCATGG
AAATGATCAATGATGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGAAT
CATGGGATATCACATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAGGA
GCATTACGGGAAGTGTATGGACCAAAGATTCAAGCAAATGGTGGCAAGCA
AGGGCCTTGAAGCTGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAAGC
ACTTTCTTCTTGCGCCACCTTCCTGTTTCAAACATGGCTGAAATCCCCGA
TCTTGAAGATGATTACAGGAAGGCAATGAAGGAATTTGCCGTTGAATTGG
AGAAGGTTGCTGAGCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGCTG
GAGGAAGGGTATTTGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACCTT
TGGCACCAAGGTCAGCAATTACCCTCCATGCCCAAAACCAGATCTGATCA
AGGGACTTAGGGCCCATACTGATGCTGGTGGCATCATCTTGCTCTTTCAG
ATGACGAAGTCAGTGGCCTCCAGCTGCTC
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