FC923106

Overview
NameFC923106
Unique NameFC923106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14386 contig Ccv1_Contig14386:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.451e-12
Identity = 50/195 (25.64%), Postives = 88/195 (45.13%), Query Frame = 3
Query:   96 FPIIDLSKLNGD--ERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQR--------FKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            FP+IDL  ++ D  +    ++ + DA E WGFF++VNHGI   +LD   + T++ + +  + +         K++V +  L+  +S V    W  T F    P  N   + +      +++ +F+ +++K+                   K   Y      F    + YPPCP+P+L  G   HTD G + +L Q
Sbjct:   58 FPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP--NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKD--YMDCFHLF-CSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ 247          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 52/197 (26.40%), Postives = 89/197 (45.18%), Query Frame = 3
Query:   84 TMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEI-PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            T EN P+IDL     D   AT + I  AC  WG F++ NHG+   LL  ++ LT   +G  + ++ K       V+  G+  + S  N   W   F +   P+++  ++ P    +Y   ++E+   ++K+A                  +     S         ++++YP CP+PD   GL AHTD+  + +L+Q
Sbjct:   53 TGENIPLIDL-----DHPDATNQ-IGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSPLNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQ 243          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 55/193 (28.50%), Postives = 91/193 (47.15%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVA----SKGLE----AVQSEV-NDLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            P+IDL      + +  +++I DA + WG F+L+NHGI  E +  +Q++ KE + + + Q  K+++A    S  +E    ++Q EV     W    F +  P S  N    P     YR+A +E+   + +V                    +   G +   +  K++ YPPCP+PDL  G+ AHTD   I +L
Sbjct:   56 PVIDL---RDPDENKMVKLIADASKEWGIFQLINHGIPDEAIADLQKVGKEFF-EHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDE-IVYLLKINYYPPCPRPDLALGVVAHTDMSYITIL 243          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 55/195 (28.21%), Postives = 83/195 (42.56%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEH----------YGKCMDQRFKQMVASKGLEAV-QSEVNDLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            PIID S  + DE    ++ I +A  NWG +++VNH I  E++  +Q + KE           Y K  D    +   +K  + + + +     W    F +  P S  N    P     YR+A +E+A  L  V                   KK   G     +  K++ YPPCP+PDL  G+ AHTD   + +L
Sbjct:   42 PIIDFS--DPDEEKLIVQ-ITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAA-GGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTIL 232          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 55/196 (28.06%), Postives = 89/196 (45.41%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEM--INDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEA-----VQSEVNDLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQMTK 659
            P+IDLS+L  D++ A  E+   + AC +WGFF+L+NHG+  E+++ ++  T++ +     ++        G+E      V SE   LDW    FL   PV   NM   P     +R+ M+++++EL+KVA                   K         F  +    P         GL  H+DA G+ LL Q+ +
Sbjct:   52 PVIDLSRLL-DQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPL----RTVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNE 242          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 58/193 (30.05%), Postives = 94/193 (48.70%), Query Frame = 3
Query:   99 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVA----SKGLEA----VQSEVN-DLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILL 644
            P+IDLS  + DE+   + ++++A + WG F++VNHGI +E++  +Q + K  +   + Q  K+++A    S+ +E     +Q EV+    W    F +  P S  N    P     YR+A +E+A  L+ V                   K    G     +  K++ YPPCP+PDL  G+ AHTD   I +L
Sbjct:   44 PVIDLS--DSDEKKI-VGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFE--LPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKD-GAGGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVL 229          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 53/196 (27.04%), Postives = 83/196 (42.35%), Query Frame = 3
Query:   90 ENFPIIDLSKLNG--DERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWESTFFLRHLPVSN--MAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            +  P+I L+ ++    +R      I +ACENWG F++V+HG+   L+  + RL ++ +    ++  RF      KG   V S +      DW         PV N   +  PD    + K  +E++   EK+                   + +            V+ YP CP+PDL  GL+ HTD G I LL Q
Sbjct:   35 DEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYS---EKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQ 227          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 48/195 (24.62%), Postives = 88/195 (45.13%), Query Frame = 3
Query:   90 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEI-PDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            E  P+IDLS ++         ++  AC  WG F++ NHG+   LLD ++ LT   +   + ++ K       V+  G+  + S  N   W   F +   P+ +  ++ P     Y + ++E+   ++K+A                  +     S  +G     ++++YP CP+PD   GL AHTD+  + +L+Q
Sbjct:   48 ETLPLIDLSDIH------VATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQ 236          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 57/218 (26.15%), Postives = 94/218 (43.12%), Query Frame = 3
Query:   24 SFLSDHRVRREIVGVKKQQITMENFPIIDLSKLNGD--ERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            SF+ D   R ++      Q + E  PII L  ++ +  +R+   + I  ACE+WG F++V+HG+  E++  +    KE +    ++  RF      KG   V S +      DW    T+F       + +  PD  + +    ++++ +L ++A                   K             V+ YP CP+PDL  GL+ HTD G I LL Q
Sbjct:   21 SFIRDEDERPKVA---YNQFSNE-IPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVV---VNFYPKCPEPDLTLGLKRHTDPGTITLLLQ 231          
BLAST of FC923106 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 53/198 (26.77%), Postives = 87/198 (43.94%), Query Frame = 3
Query:   90 ENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEA-----VQSEVNDLDWESTFFLRHLPVSNMAEI--PDLEDDYRKAMKEFAVELEKVA----XXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 650
            E+ P+IDLS  N D  +    +I DA + WG F++ NHGIS +LLD ++ L+K  +    +++ +   + KG+       +        W   F +      N      P     Y   ++E+  E+EK+A                      K    GSK      ++++YP CP+P+   GL AHTD+  + +L Q
Sbjct:   47 ESIPVIDLS--NPDVTT----LIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQ 238          
The following BLAST results are available for this feature:
BLAST of FC923106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
ACCH3_SOLLC2.451e-1225.641-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX1_ARATH4.180e-1226.40Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FLS_PETHY4.180e-1228.50Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_MALDO5.459e-1228.21Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
NCS1_COPJA9.312e-1228.06S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS_EUSGR9.312e-1230.05Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FL3H_MATIN9.312e-1227.04Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G3OX2_ARATH1.216e-1124.62Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FL3H_PETHY4.622e-1126.15Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G3OX4_ARATH6.036e-1126.77Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC31701B07EF StrClemenN Citrus clementina cDNA clone C31701B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923106 ID=FC923106; Name=FC923106; organism=Citrus clementina; type=EST; length=679bp
GGACGCAGACACAACCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAGA
AGGGAGATTGTGGGAGTTAAGAAACAACAAATAACAATGGAGAATTTTCC
AATTATTGACTTGTCAAAGCTCAATGGTGATGAGAGAAGTGCTACCATGG
AAATGATCAATGATGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGAAT
CATGGGATATCACATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAGGA
GCATTACGGGAAGTGTATGGACCAAAGATTCAAGCAAATGGTGGCAAGCA
AGGGCCTTGAAGCTGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAAGC
ACTTTCTTCTTGCGCCACCTTCCTGTTTCAAACATGGCTGAAATCCCCGA
TCTTGAAGATGATTACAGGAAGGCAATGAAGGAATTTGCCGTTGAATTGG
AGAAGGTTGCTGAGCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGCTG
GAGGAAGGGTATTTGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACCTT
TGGCACCAAGGTCAGCAATTACCCTCCATGCCCAAAACCAGATCTGATCA
AGGGACTTAGGGCCCATACTGATGCTGGTGGCATCATCTTGCTCTTTCAG
ATGACGAAGTCAGTGGCCTCCAGCTGCTC
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