FC923114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL33B_SCHPO (60S ribosomal protein L33-B OS=Schizosaccharomyces pombe GN=rpl33b PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RLYV+ L ++RSK +P TS++++EG ++KEE +Y GKR+ Y+YK+ GS R IWG +AR HGNSG VRA+F NLP K+ G +RV +YPSNI Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_CAEEL (60S ribosomal protein L35a OS=Caenorhabditis elegans GN=rpl-33 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKA--KTKKNG----SHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RLYV+ G+KR Q +TSL+++EGV KE+ +Y GKR+ Y+YKA KT K G + R IWGK+ R HGN+G VRAKF N+PP ++G R+RV +YPSNI Sbjct: 17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_RAT (60S ribosomal protein L35a OS=Rattus norvegicus GN=Rpl35a PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_MOUSE (60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWCKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_PONAB (60S ribosomal protein L35a OS=Pongo abelii GN=RPL35A PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_MACFA (60S ribosomal protein L35a OS=Macaca fascicularis GN=RPL35A PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_HUMAN (60S ribosomal protein L35a OS=Homo sapiens GN=RPL35A PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of FC923114 vs. ExPASy Swiss-Prot
Match: RL35A_BOVIN (60S ribosomal protein L35a OS=Bos taurus GN=RPL35A PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24 Identity = 53/107 (49.53%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 92 RLYVRGTILGYKRSKSNQYPNTSLIQVEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 397 RL+ + GYKR NQ +T+L+++EGV ++E +Y GKR AY+YKAK + R IWGK+ R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKITRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110 The following BLAST results are available for this feature:
BLAST of FC923114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923114 ID=FC923114; Name=FC923114; organism=Citrus clementina; type=EST; length=686bpback to top |