FC924877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_IGNH4 (30S ribosomal protein S15P/S13e OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps15p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 KG S S P + TPP W+ ++++ I + +KKG PS IG+ILRD G+ VK + G K+++I++ G+AP IPEDL+HL+K+AV +R HL + KDK S L+ +ES+I RL +YYK+ KLPP WKY+ A LV Sbjct: 7 KGKSHSKRPVRNTPPRWVPFGPEEIKALIVELSKKGYGPSMIGIILRDQFGVPLVKPIVGKKLVKIMEEQGVAPPIPEDLFHLMKRAVRVRAHLAEHPKDKHSARGLMEIESKIRRLVKYYKRVGKLPPDWKYDPERARLLV 148
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_SULSO (30S ribosomal protein S15P/S13e OS=Sulfolobus solfataricus GN=rps15p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32 Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 3 Query: 27 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 R KG S S P + P W++++ ++VE + + AK+G TPS IG+ILRD +GI VK + G K+ +IL+ GLAP+IPEDL++LI+KAV +R+H+ +DK +K L +ES+I RL RYYK KLP W Y+ A LVA Sbjct: 5 RAKGKSHSIRPARAGAPKWVRLTREEVEMLVEELAKRGYTPSMIGIILRDQYGIPLVKQIVGKKVTQILEERGLAPQIPEDLFNLIRKAVNVRRHINEYPRDKTAKKGLEEIESKIRRLTRYYKGIGKLPQEWVYDPAKAELLVA 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METLZ (30S ribosomal protein S15P/S13e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps15p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32 Identity = 66/151 (43.71%), Postives = 101/151 (66.89%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 M MH+R +GI++S PY++ P+W +++E I + K GLT +QIG++LRD HG+ VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+++ RL +YY TK+LP W Y+ TA L++ Sbjct: 1 MARMHARRRGIASSVRPYRKEVPAWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLS 151
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_SULTO (30S ribosomal protein S15P/S13e OS=Sulfolobus tokodaii GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 69/145 (47.59%), Postives = 96/145 (66.21%), Query Frame = 3 Query: 27 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 R G S S P + P W++ + ++VE + + AKKG +PS IG+ILRD +GI VK +TG K+ +IL+ GLAP+IPEDL++LI+KA +R+HL + KDK +K L +ES+I RLA YYK+ KLP WKYE A L + Sbjct: 5 RPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAPKIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYEPEKAELLAS 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRIL (30S ribosomal protein S15P/S13e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps15p PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 69/141 (48.94%), Postives = 94/141 (66.67%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 455 KG S S P T P+W++ + +VE + + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ EIPEDL +LIK+A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLP + Y S L Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPDEVEQLVVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIRQEIPEDLLNLIKRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKLPKEFVYNPEALSHL 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRAE (30S ribosomal protein S15P/S13e OS=Pyrobaculum aerophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.548e-31 Identity = 67/141 (47.52%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 455 KG S S P T P+W++ + ++VE + + A++G PSQIG+ILRD +GI V+ +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ KLPP + Y S L Sbjct: 9 KGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKYYKRVGKLPPDFVYNPQALSHL 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRAR (30S ribosomal protein S15P/S13e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps15p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31 Identity = 66/141 (46.81%), Postives = 96/141 (68.09%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 455 KG S S P T P+W++ + ++VE + A++G PSQIG++LRD +GI VKS+TG K++++L+ HG+ EIPEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ +LP + Y S L Sbjct: 12 KGRSGSVRPAHPTVPTWIQYTPEEVEQLAVELARRGFQPSQIGIVLRDQYGIPLVKSITGKKLVKVLEEHGIKYEIPEDLLNLIRRALRIRKHLEEHPKDMSSRRGLQLVESKIHRLIKYYKRVGRLPRDFVYNPQALSHL 152
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRAB (30S ribosomal protein S15P/S13e OS=Pyrococcus abyssi GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 73/157 (46.50%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH+R +G S S P + PP WL+ + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METMA (30S ribosomal protein S15P/S13e OS=Methanosarcina mazei GN=rps15p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH++ KG S+S P + PP W KI + +V K+G++ S+IG+ILRD +G+ K VTG KI ILK + +AP +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 1 MAKMHTKRKGKSSSTRPNRTEPPEWCKIGADEVTTITLDLWKQGVSTSEIGMILRDRYGVPDAKLVTGKKITTILKENNVAPNLPEDLTNLIVKALGLRKHLSTNKKDVHNKRALNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METAC (30S ribosomal protein S15P/S13e OS=Methanosarcina acetivorans GN=rps15p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 65/150 (43.33%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH++ KG S+S P + PP W KI + +V + K+G++ ++IG++LRD +G+ K +TG K+ ILK + +AP IPEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 1 MAKMHTKRKGKSSSTRPIRTDPPEWCKIGADEVTTIVLDLWKQGVSTAEIGMVLRDRYGVPDAKLITGKKVTTILKENNVAPNIPEDLTNLIVKALGLRKHLSVNKKDVHNKRSLNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150 The following BLAST results are available for this feature:
BLAST of FC924877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924877 ID=FC924877; Name=FC924877; organism=Citrus clementina; type=EST; length=724bpback to top |