FC924877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRFU (30S ribosomal protein S15P/S13e OS=Pyrococcus furiosus GN=rps15p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 71/157 (45.22%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH+R +G S S P + PP W++ + +++E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ TA LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLV 157
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRCJ (30S ribosomal protein S15P/S13e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps15p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30 Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTL 455 KG S+S P T P+W++ + ++VE + A++G PSQIG+ILRD +GI VK +TG K+ +IL+ HG+ E+PEDL +LI++A+ IRKHLE + KD S+ L LVES+IHRL +YYK+ K+P + Y S L Sbjct: 9 KGRSSSVRPPHPTVPTWIQYTPEEVEQLAVELARRGFPPSQIGIILRDQYGIPLVKPITGKKLTKILEEHGIKQELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLIKYYKRVGKIPQDFVYNPEALSHL 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_ARCFU (30S ribosomal protein S15P/S13e OS=Archaeoglobus fulgidus GN=rps15p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30 Identity = 67/141 (47.52%), Postives = 94/141 (66.67%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 431 M +H+R +G S S Y+ +PP W+ +S ++VE + + +G PS IG+ILRD +GI VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK+ LP WKY Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METVS (30S ribosomal protein S15P/S13e OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps15p PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M +HS +G S S P + P W+ +S+++V+ I + AK G + IG ILRD +GI VK VTG + I+K G E+PEDL++L+KKA+ +R HLE N +D SK L L+ES+I RL +YYK TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTKPLRTEVPEWVSMSAEEVQAKIVEMAKDGNQSAIIGNILRDMYGIPNVKLVTGKSVSSIMKDAGFYSEVPEDLFNLMKKAINLRNHLENNPRDIHSKVGLNLIESKIRRLVKYYKGTKVLPATWRYSPQTARLLV 150
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_SULAC (30S ribosomal protein S15P/S13e OS=Sulfolobus acidocaldarius GN=rps15p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 66/144 (45.83%), Postives = 94/144 (65.28%), Query Frame = 3 Query: 27 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 R KG S S P + PP W++ + ++VE + + AK+G PS IG++LRD +G+ VK +TG K+ IL+ + P+IPEDL++L+++AV IR+HL KDK +K L VES+I RLA YYK+T KLP W Y+ A LV Sbjct: 5 RAKGNSHSIRPVRSGPPKWVRFTREEVELLVEELAKRGYPPSMIGMVLRDQYGVPLVKQITGRKLTAILQDRNMKPKIPEDLFNLMRRAVNIRRHLFEYPKDKSAKRGLEEVESKIRRLASYYKETGKLPQEWSYDPAKAELLV 148
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PYRHO (30S ribosomal protein S15P/S13e OS=Pyrococcus horikoshii GN=rps15p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH+R +G S S P + PP WL + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLDYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPRDWRYDPEQAKLLV 157
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METHJ (30S ribosomal protein S15P/S13e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30 Identity = 63/151 (41.72%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 M MH+R +GIS S PY+ P W + + I ++G + ++IG+++RD +G+ VK TG KI +IL+ + LA EIPEDL +LI+KA+ +RKHL N++D +K +L+L ES++ RL +YY +KKLP W Y+ TA L++ Sbjct: 1 MARMHARRRGISRSVRPYRTQAPEWSNTDKEAIIKQIVDLRRQGSSTAEIGLVMRDKYGVPSVKLATGKKITQILRDNDLASEIPEDLRNLIEKALGMRKHLAENKRDIHNKRQLMLTESKVRRLVKYYVSSKKLPKDWVYKPETAEILLS 151
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METS5 (30S ribosomal protein S15P/S13e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 66/145 (45.52%), Postives = 93/145 (64.14%), Query Frame = 3 Query: 27 RGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 R G S S P + P W++ S ++VE I + AKKG TPS IG++LRD +GI K + G K+ + LK GLA +IPEDL++LI++AV +R+HL DK +K L +ES+I RL+RYYK+ +KLP W Y+ A LV+ Sbjct: 5 RANGSSHSTRPVRTGSPKWVRFSREEVEMLIEELAKKGYTPSMIGIVLRDQYGIPLAKPIIGKKVNQFLKDKGLASQIPEDLFNLIRRAVNVRRHLNEYPGDKTAKKGLEEIESKIRRLSRYYKRVEKLPQDWTYDPAKAELLVS 149
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METM7 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 66/150 (44.00%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M +HS +G S S P + P W+ +S++D+E I + AK G + IG ILRD +G+ VK VTG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 1 MARLHSGKRGSSGSTRPLRTEVPEWVSMSAEDIEAKIVEMAKDGKQSAIIGNILRDMYGVPSVKLVTGKSVSSIMKEAGFYTEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPDTARLLV 150
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_CALMQ (30S ribosomal protein S15P/S13e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps15p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 68/133 (51.13%), Postives = 90/133 (67.67%), Query Frame = 3 Query: 33 KGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 431 +G S S P +T P WL S +DVE + + A++G TPS IGVILRD +GI VK VT +I IL+ +GL P+IPEDL LI++AV IR+HLE + KD +K L+L ES+IHRL +YYK+T LP + Y Sbjct: 9 RGSSGSVRPATKTIPPWLSYSPEDVERLVVELARRGFTPSLIGVILRDQYGIPLVKIVTNKRITEILEENGLKPQIPEDLMALIRRAVNIRRHLEEHPKDMSAKKGLLLTESKIHRLIKYYKRTGVLPLDFTY 141 The following BLAST results are available for this feature:
BLAST of FC924877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924877 ID=FC924877; Name=FC924877; organism=Citrus clementina; type=EST; length=724bpback to top |