FC924877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS13_ENCCU (40S ribosomal protein S13 OS=Encephalitozoon cuniculi GN=RPS13 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28 Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 428 M MHS GKG S S PY P+WL S +++ ++ + KG+ IG LRD +GI + V G I R L+ +G+ P+IP DL L+ +A +R HL RKD +K+RLILV SR++R+ARYYK+ ++P WK Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVARYYKRKMRIPGNWK 140
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METST (30S ribosomal protein S15P/S13e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps15p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28 Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 75 PSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 P W++ S +++E+ I K K+G + SQIG+ LRD HGI K+V G KI ILK +G E PEDL +LIK+AV IR+HLE N KD +K LI +ES+I RL +YY + LP W+Y+ TA+ LV Sbjct: 5 PEWVEQSPEEIEELIVKLHKEGQSTSQIGITLRDQHGIPNTKAVLGEKITDILKRNGTDFEYPEDLLNLIKRAVNIREHLEENPKDIHTKRGLIKIESKIRRLVKYYTRNNVLPEGWRYDPKTAALLV 132
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METS3 (30S ribosomal protein S15P/S13e OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps15p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 75 PSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 P W+ S +++E+ I KF K+G + S+IG+ILRD +GI VK VTG +I +ILK + A + PEDL +LIK+AV IR HL N KD SK L ++ESRI RLA YY LP W+Y A+ LV Sbjct: 4 PEWVTYSDEEIEEMILKFNKEGKSTSEIGIILRDQYGIPSVKEVTGERITQILKRNDQAGKYPEDLMNLIKRAVNIRDHLAENPKDLHSKRGLTIIESRIRRLASYYVNEGALPEGWRYNPKEAALLV 131
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_NANEQ (30S ribosomal protein S15P/S13e OS=Nanoarchaeum equitans GN=rps15p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26 Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 3 Query: 21 HSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 431 H R G S S P + T P W + VE+ I + AK+G +P+ IG+ILRD +GI V+ G + L+ GL P+IP DL +L+K+A + KH+E N +D +K L+ S+IHRLA+YYK+ LP WKY Sbjct: 7 HKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLAKYYKRKGVLPKDWKY 143
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METB6 (30S ribosomal protein S15P/S13e OS=Methanoregula boonei (strain 6A8) GN=rps15p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 62/151 (41.06%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 M MH+R +G S+S P + P+W +E I K+G + S IG++LRD +G+ VK VTG I IL + ++ EIPEDL L+ KA+ +RKHL N KD +K +L LVE++I RL +YY T+KLP + Y+ A L++ Sbjct: 1 MARMHARRRGKSSSVRPARNEAPAWSNTDKAAIEKLIVDLRKEGTSASMIGLVLRDRYGVPDVKMVTGKSIGDILTENKVSSEIPEDLRDLMVKALGLRKHLGENPKDLHNKRQLHLVEAKIRRLVKYYIGTRKLPAGFTYKPENAEILLS 151
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_METTP (30S ribosomal protein S15P/S13e OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps15p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24 Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLER----------------NRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 461 M MHSR KG S S P P W +S +++E I ++G++ + IG+ LRD +G+ +K + G + L+ PEIPEDL +L++KA+ +R+HL R KD +K L LVES+I RL RYYK+ +LP W+Y TA ++ Sbjct: 1 MARMHSRKKGSSGSRPPVVDKLPEWCDVSKEELEKTIMTLHERGMSNAMIGLTLRDQYGVPNLKLILGKSLSSFLRDRNALPEIPEDLSNLMRKALRLRRHLLRAQPRGTVSDTSISRLPRTKDIHNKRALQLVESKIRRLVRYYKQVGRLPATWEYRPETAEIQIS 167
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_PICTO (30S ribosomal protein S15P/S13e OS=Picrophilus torridus GN=rps15p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYE 434 M MH+R +G S S R PSW++ S ++++ I K K+G+T S IG+ LRD + I + V K+ ++LK + L ++PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK+T +LP W E Sbjct: 1 MARMHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTSRLPQDWSLE 142
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_HALSA (30S ribosomal protein S15P/S13e OS=Halobacterium salinarium GN=rps15p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.992e-22 Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 458 M MH+R +G S S P PP W + +E+ + + A++G PSQIG+ LRD + VK TG K+ IL+AH PE+PED +L++KAV + +H+E N +D +K L +S+I RLA YY + KL + Y TA ++ Sbjct: 1 MARMHTRRRGSSGSDRPTADEPPEWSDVDEDAIEERVVELAEQGHDPSQIGLKLRDEGVQGTPVPDVKLATGKKVTEILEAHDAEPELPEDFRNLLEKAVRLHEHVEANGQDHQNKRALQNTQSKIRRLADYY-RGDKLDEEFAYSYETAREII 153
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_THEAC (30S ribosomal protein S15P/S13e OS=Thermoplasma acidophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 425 M MH+R +G S S Y PSW++ S +V + I K G+ PS IG+ LRD +GI VK+V G K+ ++L GL ++PEDL +LIK+ + KH+E N KD+ +K L+ +++ RL +YYK+T L W Sbjct: 1 MARMHTRKRGRSGSKKVYG-VQPSWIQYSKDEVINTIVNLKKSGVPPSVIGIKLRDQYGIPTVKAVLGMKLGKVLSEKGLKDDVPEDLGNLIKRYNNVAKHVELNPKDQANKRGRDLIMAKMLRLVKYYKRTGVLDEKW 138
BLAST of FC924877 vs. ExPASy Swiss-Prot
Match: RS15_HALWD (30S ribosomal protein S15P/S13e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps15p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 9 MGCMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 398 M MH+R +G S S P PP W I + +E+ + + A++G PSQIG+ LRD I VK T K+ IL+ H PE+PEDL +L+++A+ +R+H++ N +D +K L ES+I RLA YY+ Sbjct: 1 MARMHTRRRGSSGSDKPVADDPPEWSDIDADAIEERVVELAEQGHEPSQIGMKLRDEGVKGTPIPDVKLATDKKVTTILEEHNAKPELPEDLRNLMERAIRLRRHVDENGQDMQNKRALQNTESKIRRLASYYR 134 The following BLAST results are available for this feature:
BLAST of FC924877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924877 ID=FC924877; Name=FC924877; organism=Citrus clementina; type=EST; length=724bpback to top |