FC924883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: OGDHL_XENLA (2-oxoglutarate dehydrogenase-like, mitochondrial OS=Xenopus laevis GN=ogdhl PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.135e-55 Identity = 107/213 (50.23%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLR-KQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSA-SDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRLATAM 633 G+V+LLPHG +G GPEHSSAR ERFLQMS+D+ PE Q+ +CNW +VN + PA+YFHVLRRQI FRKPLI+ +PK+LLRH + KS+ FDD+ K GT F+R+I + S + ++R++ C+GKVYYEL +ER ++ S VAI R+EQ+ PFP+DLV++E ++Y +E+VWCQEE NMG Y Y+ R T + Sbjct: 769 GIVLLLPHGMEGMGPEHSSARPERFLQMSNDDSDAYPEFTQDFDVSQLFDCNWIVVNCSNPASYFHVLRRQILLPFRKPLIIFTPKSLLRHPEAKSS---FDDM-------KTGTNFQRVIPENGAASHSPQEVKRVIFCTGKVYYELVKERHRKGLDSQVAITRLEQISPFPFDLVKQEAEKYATSELVWCQEEHKNMGYYDYVKARFLTIL 971
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_OCHA4 (2-oxoglutarate dehydrogenase E1 component OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucA PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.696e-52 Identity = 110/207 (53.14%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHGY+GQGPEHSSARLER+LQM ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 769 GLVCLLPHGYEGQGPEHSSARLERWLQMCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAVSTLNE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 954
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUAB (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus GN=sucA PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52 Identity = 109/207 (52.66%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + R KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDARYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUA2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus (strain 2308) GN=sucA PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52 Identity = 109/207 (52.66%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + R KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDARYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUA1 (2-oxoglutarate dehydrogenase E1 component OS=Brucella abortus (strain S19) GN=sucA PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.779e-52 Identity = 109/207 (52.66%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + R KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDARYNKDKGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUSU (2-oxoglutarate dehydrogenase E1 component OS=Brucella suis GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUSI (2-oxoglutarate dehydrogenase E1 component OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUO2 (2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUME (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BRUMB (2-oxoglutarate dehydrogenase E1 component OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucA PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.418e-52 Identity = 108/207 (52.17%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGAYTYISPRL 621 GLV LLPHG++GQGPEHSSARLER+LQ+ ++ N Q+ NVTTPANYFH+LRRQ+ R FRKPLI+M+PK+LLRHK S L+E + G F + + KD+ + IRR+VLCSGKVYY+L EER+KR DV + RVEQL PFP + EL R+ +AE+VWCQEEP NMGA+++I P L Sbjct: 773 GLVCLLPHGFEGQGPEHSSARLERYLQLCAED------------------NMQVANVTTPANYFHILRRQMKRDFRKPLIMMTPKSLLRHKRAISTLAE---LSGESSFHRLLWDDAQYNKDEGIKLQKDAKIRRVVLCSGKVYYDLYEEREKRGIDDVYLLRVEQLYPFPAKALINELSRFRHAEMVWCQEEPKNMGAWSFIDPYL 958 The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bpback to top |