FC924883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RICTY (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia typhi GN=sucA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.668e-39 Identity = 99/213 (46.48%), Postives = 126/213 (59.15%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAYTYISPRLATAMK 636 GLVVLLPH ++GQGPEHSSARLERFLQ++ + N I TTPA+ FH+LRRQI RKPLIVMSPK+LLRHK S L E + T F ++ D+ D + I +++LCSGKVYY+L +R S++ I R+EQL PF LV LK+Y A+ +WCQEEP NMGA+ YI+ L A+K Sbjct: 708 GLVVLLPHAFEGQGPEHSSARLERFLQLAAEE------------------NMYITYPTTPASIFHLLRRQILESIRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFIPVL-DEVTKID-KNNITKVILCSGKVYYDLFAKRVHN--SNIVIIRLEQLYPFEKTLVASLLKKYNKAQAFIWCQEEPKNMGAWNYIAEHLNDALK 888
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: DHTK1_PONAB (Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Pongo abelii GN=DHTKD1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.791e-39 Identity = 94/209 (44.98%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSAS--DVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPR 618 G+V LLPHG+DG GP+HSS R+ERFLQM D + N +V+ TTPA YFH+LRRQ+ R FRKPLIV SPK LLR S L E GT F +I D S + ++ LV CSGK +Y L ++R+ A D AI RVE+LCPFP D +Q+E+ +Y + + +W QEEP NMG + ++SPR Sbjct: 692 GIVTLLPHGHDGAGPDHSSCRIERFLQMCDSAEEGVDG---------DTVNMFVVHPTTPAQYFHLLRRQMVRNFRKPLIVASPKMLLRLPAAVSTLQEM----------APGTTFNPVIGDS---SVDPKKVKTLVFCSGKHFYSLMKQRESLGAKKHDFAIIRVEELCPFPLDSLQQEMSKYKHVKDHIWSQEEPQNMGPWLFVSPR 878
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RICCN (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia conorii GN=sucA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.258e-39 Identity = 100/213 (46.95%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATAMK 636 GLVVLLPH ++GQGPEHSSARLERFLQ++ +N N + TTPA+ FH+LRRQI RKPLIVMSPK+LLRHK S L E + T F ++ D+ D I +++LCSGKVYY+L E R S++AI R+EQL PF LV LK+Y E +WCQEEP NMG + YI L A+K Sbjct: 707 GLVVLLPHAFEGQGPEHSSARLERFLQLAAEN------------------NMYVTYPTTPASIFHLLRRQILDDTRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFLPVL-DEVTKVD-TNNITKVILCSGKVYYDLFEMRGNN--SNIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGTWCYIVSHLNDALK 887
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RICFE (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia felis GN=sucA PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 8.173e-39 Identity = 97/213 (45.54%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATAMK 636 GLVVLLPH ++GQGPEHSSARLERFLQ++ ++ N + TTPA+ FH+LRRQI RKPLI+MSPK+LLRHK S L E + T F ++ + N I +++LCSGKVYY+L E R S++AI R+EQL PF LV LK+Y E +WCQEEP NMGA+ YI L +K Sbjct: 756 GLVVLLPHAFEGQGPEHSSARLERFLQLAAED------------------NMYVTYPTTPASIFHLLRRQILDDTRKPLIIMSPKSLLRHKYAVSKLDELG----------ENTTFLPVLDEVNKVD--TNNITKVILCSGKVYYDLFEMRGNN--SNIAIIRLEQLYPFEKKLVASLLKKYNRTQEFIWCQEEPKNMGAWRYIVSHLNDVLK 936
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIN (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans GN=sucA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.821e-38 Identity = 89/208 (42.79%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRL 621 GL++LLPHGY+GQGPEHSSARLERFLQ+ +D N Q+ N+TT A YFH+LRRQ+ R +RKPL++++PK+LLR ++LS +D+ QG F+ ++ D +G + I ++V +GKVYY+L + + + +VA+ RVEQ+ PFP +Q LK + NA + VWCQEEP N GA+ ++ R+ Sbjct: 701 GLIMLLPHGYEGQGPEHSSARLERFLQLC--------ALD----------NMQVCNLTTAAQYFHLLRRQMLRNYRKPLVIVTPKSLLRF---PASLSPVEDI-------LQGA-FREILIDDSGSK--PDKIEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERI 877
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_LEPIC (2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=sucA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.821e-38 Identity = 89/208 (42.79%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRL 621 GL++LLPHGY+GQGPEHSSARLERFLQ+ +D N Q+ N+TT A YFH+LRRQ+ R +RKPL++++PK+LLR ++LS +D+ QG F+ ++ D +G + I ++V +GKVYY+L + + + +VA+ RVEQ+ PFP +Q LK + NA + VWCQEEP N GA+ ++ R+ Sbjct: 701 GLIMLLPHGYEGQGPEHSSARLERFLQLC--------ALD----------NMQVCNLTTAAQYFHLLRRQMLRNYRKPLVIVTPKSLLRF---PASLSPVEDI-------LQGA-FREILIDDSGSK--PDKIEKVVFSAGKVYYDLMKYKDENKIKNVALVRVEQIYPFPAKEIQSSLKTFKNAKQFVWCQEEPKNQGAWFFVRERI 877
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_RICPR (2-oxoglutarate dehydrogenase E1 component OS=Rickettsia prowazekii GN=sucA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.378e-38 Identity = 98/213 (46.01%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAYTYISPRLATAMK 636 GLVVLLPH ++GQGPEHSSARLERFLQ++ + N I TTPA+ FH+LRRQI RKPLIVMSPK+LLRHK S L E + T F ++ D+ D + +++LCSGKVYY+L R S++ I R+EQL PF LV LK+Y A+ +WCQEEP NMGA+ YI+ L A+K Sbjct: 707 GLVVLLPHAFEGQGPEHSSARLERFLQLAAEE------------------NMYITYPTTPASIFHLLRRQILESTRKPLIVMSPKSLLRHKYAVSKLDELG----------ENTTFIPIL-DEVTKID-TNNVTKVILCSGKVYYDLFAMRTNN--SNIVIIRLEQLYPFEKKLVASLLKKYNKAQAFIWCQEEPKNMGAWHYIATHLNDALK 887
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_HAEIN (2-oxoglutarate dehydrogenase E1 component OS=Haemophilus influenzae GN=sucA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.036e-38 Identity = 91/202 (45.05%), Postives = 129/202 (63.86%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLE-EGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAY 600 GLV+LLPHGY+GQGPEHSSARLER+LQ+ E N Q+ +TPA +H+LRRQ R R+PLI +SPK+LLRH S+L E + GT F+ +I + + +L+ + ++R+V+CSGKVYY+L E+R+ + DVAI R+EQL PFP++ V++ L+ Y + + VWCQEEP+N GA+ Sbjct: 716 GLVMLLPHGYEGQGPEHSSARLERYLQLC------------------AEQNMQVCVPSTPAQVYHMLRRQSLRKMRRPLIAISPKSLLRHPLAVSSLDELIN----------GT-FQTVIGEID---ELDPKDVKRVVMCSGKVYYDLLEQRRANNQKDVAIIRIEQLYPFPHEDVKKALEPYAHVTDYVWCQEEPLNQGAW 885
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_AZOVI (2-oxoglutarate dehydrogenase E1 component OS=Azotobacter vinelandii GN=sucA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASDVAICRVEQLCPFPYDLVQRELKRYPNAE-IVWCQEEPMNMGAY 600 GL +LLPHGY+GQGPEHSSARLER+LQ+ E N Q+ TTPA +H+LRRQ+ R RKPL+ ++PK+LLRHK S L + HP + + + ++ RLVLCSGKVYY+L ++R D+AI R+EQL PFP + + + Y N + +VWCQEEPMN GA+ Sbjct: 721 GLTMLLPHGYEGQGPEHSSARLERYLQLC------------------AEQNIQVCVPTTPAQVYHMLRRQVIRPLRKPLVALTPKSLLRHKSAISTLEDLALGSFHPVLPEVDSLDPKKVE-------------RLVLCSGKVYYDLLDKRHAEGREDIAIVRIEQLYPFPEEELAEVMAPYTNLKHVVWCQEEPMNQGAW 890
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACHD (2-oxoglutarate dehydrogenase E1 component OS=Bacillus halodurans GN=odhA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.629e-37 Identity = 92/217 (42.40%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASD---VAICRVEQLCPFPYDLVQRELKRYPNA-EIVWCQEEPMNMGAYTYISPRLATA 630 GLV LLPHGY+GQGPEHSSARLERFL ++ +N NW I N T+ A YFH+LRRQ ++ +PLI+M+PK+LLR++ S++ E RFK +++ N + E + R+VLCSGK+ +L + +K + D V I RVEQL PFP + +Q RYPN EIVW QEEP NMGA+ ++ ++ A Sbjct: 719 GLVCLLPHGYEGQGPEHSSARLERFLVLAAEN------------------NWTIANCTSAAQYFHILRRQAAILNTDSVRPLIMMTPKSLLRNQKVASSVEELTT-----------GRFKTVLEQPN-LGESHEKVERIVLCSGKIAIDLQDRIEKEADKDWDWVHIVRVEQLYPFPKEPLQEIFARYPNVKEIVWSQEEPRNMGAWPFVQSKIRRA 905 The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bpback to top |