FC924883

Overview
NameFC924883
Unique NameFC924883
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1790 contig Ccv1_Contig1790:10..653. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACC7 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain AH187) GN=odhA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.351e-35
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGMK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACC4 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain B4264) GN=odhA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.351e-35
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  +V + R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGMK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEVHVVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACLD (2-oxoglutarate dehydrogenase E1 component OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=odhA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.221e-34
Identity = 87/213 (40.85%), Postives = 117/213 (54.93%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQIHRGFR---KPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEERKKRSASD--VAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLVVLLPHGY+GQGPEHSS R ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ     R   +PLI+M+PK+LLR+ +  S + E  +    P            + + +G S   + + RLVL SGKV  ++ +   K       + I RVE+L PFP   ++    + PN  EIVW QEEP NMGA+ YI P L
Sbjct:  717 GLVVLLPHGYEGQGPEHSSGRTERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQAKMLLREEIRPLIIMTPKSLLRNPNTVSEVQELSNSSFKP------------VYEMSGLSHQYDKVTRLVLSSGKVSIDISDHFNKMEGEKDWLHIARVEELYPFPAKHIKAIFSKLPNLEEIVWVQEEPQNMGAWNYIEPYL 899          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACHK (2-oxoglutarate dehydrogenase E1 component OS=Bacillus thuringiensis subsp. konkukian GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACCZ (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain ZK / E33L) GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACC3 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain 03BB102) GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACC2 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain G9842) GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  +V + R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEVHVVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACC1 (2-oxoglutarate dehydrogenase E1 component OS=Bacillus cereus (strain ATCC 10987) GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  S+  + +  P  +++    K               ++RLVL +GK+  +L  E    + + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASVLGTEAVRPLVLMTPKSLLRHPLTLSTASQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGKHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACAN (2-oxoglutarate dehydrogenase E1 component OS=Bacillus anthracis GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  ++  + +  P  +++    K               ++RLVL +GK+  +L  E    R + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTANQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGRHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
BLAST of FC924883 vs. ExPASy Swiss-Prot
Match: ODO1_BACAC (2-oxoglutarate dehydrogenase E1 component OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=odhA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34
Identity = 85/215 (39.53%), Postives = 124/215 (57.67%), Query Frame = 1
Query:    1 GLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMDPTLRKQIQECNWQIVNVTTPANYFHVLRRQ---IHRGFRKPLIVMSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNGHSDLEEGIRRLVLCSGKVYYELDEE----RKKRSASDVAICRVEQLCPFPYDLVQRELKRYPN-AEIVWCQEEPMNMGAYTYISPRL 621
            GLV+LLPHGY+GQGPEHSSAR ERFLQ++ +N                  NW + N+T+ A YFH+LRRQ   +     +PL++M+PK+LLRH    S  ++  + +  P  +++    K               ++RLVL +GK+  +L  E    R + +  ++ I R+EQL PFP + VQ  +KR+ N  EI+W QEEP NMGA+ Y++P L
Sbjct:  712 GLVLLLPHGYEGQGPEHSSARPERFLQLAAEN------------------NWTVANLTSAAQYFHILRRQASILGTEAVRPLVLMTPKSLLRHPLTLSTANQLSEGRFQPALEQENLGTK------------PNKVKRLVLSTGKMAIDLAAEIESGRHEYNLDEIHIVRIEQLYPFPAEKVQSIIKRFKNLEEIIWVQEEPRNMGAWHYMAPIL 896          
The following BLAST results are available for this feature:
BLAST of FC924883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
ODO1_BACC79.351e-3539.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACC49.351e-3539.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACLD1.221e-3440.852-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACHK1.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACCZ1.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACC31.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACC21.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACC11.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACAN1.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]
ODO1_BACAC1.595e-3439.532-oxoglutarate dehydrogenase E1 component OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YL02FM1 TF Citrus clementina cDNA clone KN0AAP1YL02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC924883 ID=FC924883; Name=FC924883; organism=Citrus clementina; type=EST; length=644bp
GGACTTGTTGTGCTGCTCCCACATGGTTATGATGGTCAGGGCCCTGAACA
TTCAAGTGCACGATTGGAGCGTTTCCTTCAGATGAGTGATGACAATCCAT
TTGTTATACCTGAGATGGATCCAACTCTTCGGAAACAAATTCAAGAATGT
AACTGGCAGATTGTGAATGTTACAACTCCTGCTAATTATTTCCATGTTTT
GCGGCGTCAGATACACAGGGGATTCCGTAAGCCTCTCATCGTGATGTCAC
CCAAAAACCTGTTGCGTCACAAGGACTGCAAATCAAATCTTTCCGAGTTT
GATGATGTCCAAGGTCACCCTGGTTTTGACAAACAAGGGACCAGATTTAA
GCGGCTTATTAAGGATCAGAATGGGCACTCTGATCTTGAGGAGGGTATCA
GACGTCTGGTTCTTTGTTCTGGAAAGGTTTATTACGAGCTTGATGAAGAG
CGGAAGAAGCGCAGTGCAAGTGATGTTGCAATTTGCAGGGTGGAACAGCT
TTGTCCTTTCCCATATGACCTGGTTCAGCGTGAGCTTAAACGATATCCAA
ATGCCGAGATCGTTTGGTGCCAGGAAGAGCCAATGAACATGGGTGCGTAC
ACCTACATTTCACCCCGACTTGCCACTGCCATGAAAGCATTGGG
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