FC924894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_ORYSJ (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica GN=Os08g0127700 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.445e-37 Identity = 105/262 (40.08%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 99 MAPASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNM-------------------------------RIAAD----EKIEKIVMIQQSMPVMSVRD------------------MKLITKMV*SLMRVTLRILPQVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFY 725 +APA V D +EIN H+P YM APWY ++ P +LKHQR K + YDRGAK FQA+ YRKGACENC AM+H+ S MERPR A TN+ R+ AD E+ K + +Q + + +D +K+ V ++ +V+K V G G TGT R+LRIRED KYLLNLD NSAYYDPK RSMRED PD +PN+KFY Sbjct: 28 LAPAEVDE----DGKEINPHIPQYMSSAPWYLNADKP-SLKHQRNWKSD-PNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKYLKEQQLKKLEEKDGEEGDENVASEEEDEEDGLKIDEAKVDESAQMDFA---KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFY 280
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_ORYSI (Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica GN=OsI_27673 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 9.445e-37 Identity = 105/262 (40.08%), Postives = 132/262 (50.38%), Query Frame = 3 Query: 99 MAPASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNM-------------------------------RIAAD----EKIEKIVMIQQSMPVMSVRD------------------MKLITKMV*SLMRVTLRILPQVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFY 725 +APA V D +EIN H+P YM APWY ++ P +LKHQR K + YDRGAK FQA+ YRKGACENC AM+H+ S MERPR A TN+ R+ AD E+ K + +Q + + +D +K+ V ++ +V+K V G G TGT R+LRIRED KYLLNLD NSAYYDPK RSMRED PD +PN+KFY Sbjct: 28 LAPAEVDE----DGKEINPHIPQYMSSAPWYLNADKP-SLKHQRNWKSD-PNYTKSWYDRGAKLFQANKYRKGACENCGAMTHDKKSCMERPRSVGAKWTNINIAPDEKVESFELDYDGKRDRWNGYDPSTYTRVIADYEAREEARKKYLKEQQLKKLEEKDGEEGDENVASEEEDEEDGLKIDEAKVDESAQMDFA---KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFY 280
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_CHICK (Pre-mRNA-splicing factor SLU7 OS=Gallus gallus GN=SLU7 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.796e-26 Identity = 93/253 (36.76%), Postives = 118/253 (46.64%), Query Frame = 3 Query: 102 APASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQ--KESLQSNINLCYDRGAKTFQ-AD*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIEKIVMIQQSMPVMSVRD----------MKLITKMV-*SLMRVTLRI-----------LPQVKK---------GVCGNGSGITGTN---------RDLRIREDIPKYLLNLDENSAYYDPKIRSMRED--LNPDDNPNEKFY 725 APA V + ++IN H+P Y+ PWY LKHQR Q K+ S+ Y RG K A YRKGACENC A++H MERPRK A T M IA DE ++ +M RD MK++ + L + TL+ L QV++ + + G N R+LRIREDI KYL NLD NSAYYDPK R+MRE+ N NP+E Y Sbjct: 46 APAEVDEEG----KDINPHIPQYISSVPWYIDPSKRPTLKHQRPQPEKQKQYSSSGDWYKRGVKEHSIATRYRKGACENCGALTHKKKDCMERPRKVGAKYTGMNIAPDEHVQPQLMFDYD----GKRDRWNGYNPEEHMKIVEEYAKVDLAKRTLKAQKLQEELASGKLEQVERDHNSEDEDEDKYADDIDMPGQNFDSKRRITVRNLRIREDIAKYLRNLDPNSAYYDPKTRAMRENPYANTGKNPDEVGY 290
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7A_ARATH (Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana GN=At1g65660 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 63/111 (56.76%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 99 MAPASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIE 431 +APA V D +EIN H+P YM APWY SE P +LKHQRK K + YDRGAK FQA+ YRKGAC+NC AM+H A + M+RPRK A TNM IA DEKIE Sbjct: 28 LAPAEVDE----DGKEINPHIPQYMSSAPWYLNSEKP-SLKHQRKWKSD-PNYTKSWYDRGAKIFQAEKYRKGACQNCGAMTHTAKACMDRPRKIGAKYTNMNIAPDEKIE 132 HSP 2 Score: 84.3445 bits (207), Expect = 7.037e-16 Identity = 42/62 (67.74%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 540 QVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFY 725 +V+K V G G TGT R+LRIRED KYLLNLD NSA+YDPK RSMRED PD +PN+KFY Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNDKFY 280
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7B_ARATH (Pre-mRNA-splicing factor SLU7-B OS=Arabidopsis thaliana GN=At4g37120 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24 Identity = 60/111 (54.05%), Postives = 74/111 (66.67%), Query Frame = 3 Query: 99 MAPASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIE 431 +APA V D +EIN H+P YM APWY KSE P +LKHQ+ K + + YDRG K +QA+ YRKGAC NC AM+H++ + M+RPRK A TNM IAADEKIE Sbjct: 28 LAPAEVDE----DGKEINPHIPEYMSKAPWYLKSEQP-SLKHQKNWKIEPEPK-KIWYDRGKKIYQAEQYRKGACINCGAMTHSSKACMDRPRKIGAKYTNMNIAADEKIE 132 HSP 2 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 43/62 (69.35%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 540 QVKKGVCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDDNPNEKFY 725 +V+K V G G TGT R+LRIRED KYLLNLD NSA+YDPK RSMRED PD +PNEKFY Sbjct: 219 KVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFY 280
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_DROME (Pre-mRNA-splicing factor Slu7 OS=Drosophila melanogaster GN=Slu7 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 78/228 (34.21%), Postives = 111/228 (48.68%), Query Frame = 3 Query: 102 APASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQA-D*YRKGACENCEAMSHNANSIMERPRKRRA------------ILTNMRIAADEKIEKIVMIQQSMPVMSVRDMKLITKMV*SLMRVTLRILPQVK-KGVCGN-----------GSGITG----TNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNP 698 APA+V + +IN H+P Y+ +APWY S P LKHQR Q E Q ++ +G T + +RKGACENC A++H +ERPRK +A ++ + DEK ++ + + + + + + L L+ P + GN G+ + T R+LRIRED KYL NLD NSAYYDPK RSMR++ NP Sbjct: 49 APAAVDEEG----RDINPHIPQYISNAPWYYGSAGP-TLKHQRPQHEDEQGQLDKRAPKGLNTARIITKFRKGACENCGAVTHKRKDCLERPRKVQAKYAESIVVHDEHLVNEAAVNYDEKRDRWSSYDPANHREIIEEYEKVEEAKRQLKAEKLKNDPDAEISDEEGNEDKYVDEVDMPGTKVDSKQRITVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPNP 271
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_CAEEL (Pre-mRNA-splicing factor SLU7 OS=Caenorhabditis elegans GN=K07C5.6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-19 Identity = 75/236 (31.78%), Postives = 104/236 (44.07%), Query Frame = 3 Query: 102 APASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQR--KQKESLQSNINLCYDRGAKTFQAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAAD---------------------------EKIEKIVMIQQSMPVMSVRDMKLITKMV*SLMRVTLRILPQVKKGVCGNGSGITGTNRDLRIR-----------EDIPKYLLNLDENSAYYDPKIRSMRED 689 APA V ++ D IN H+P+++ PWY SE P LKHQR +++E + I+ Y +G A +RKGACENC AM H +RPRK A TN IA D + IE ++++ V+ +MK + T + + + + G + D+ R ED KYL NL ENS YYDPK RSMRE+ Sbjct: 44 APAMVDVQTGRD---INPHIPMFISQNPWYVPSEGP-TLKHQRPHEEREKKMTQIHEWYQKGTTGKSATKFRKGACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPSTHKQVIEDYEHLEEARKVVREHEMK-----EGEVEPATTEDGAPKDEDMYAEDADMAGVSVDMDSRTRITVRNLRIREDTAKYLYNLAENSPYYDPKSRSMREN 270
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_ASPFU (Pre-mRNA-splicing factor slu7 OS=Aspergillus fumigatus GN=slu7 PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 73/229 (31.88%), Postives = 102/229 (44.54%), Query Frame = 3 Query: 105 PASVGSKSTVDWEEINTHVPLYMKHAPWYAKSE--VPDNLKHQRKQKESLQSNINLCYDRGAKTFQA-D*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIEKIVM----IQQSMPVMSVRDMKLITKMV*SLMRVTLRILPQVKKG----------------------VCGNGSGITGTNRDLRIREDIPKYLLNLDENSAYYDPKIRSMREDLNPDD 704 PA V SK E N ++P ++ P+Y E D L+HQR QK++ + YDRG + A YRKGACENC AM+H + + RPRK A T I ADE ++ + + + + + + + L ++ P + G G + R+LRIRED KYLLNLD +SA YDPK R M + DD Sbjct: 5 PADVASK------ERNEYIPSFIAKKPFYIDDESTANDYLEHQRLQKQATDQS--KWYDRGKRAGPAATKYRKGACENCGAMTHKSKECLSRPRKLGAKWTGKDIQADEVVQNVELGWDAKRDRWNGYDPSEYRQVIEEYEELEKLKRNTKPGAQDGKKIMDGELDDEEAAIEEARYAEESDMGRQQSTATRNLRIREDTAKYLLNLDLDSAKYDPKTRRMVDMGAQDD 225
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_CRYNE (Pre-mRNA-splicing factor SLU7 OS=Cryptococcus neoformans GN=SLU7 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17 Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 102 APASVGSKSTVDWEEINTHVPLYMKHAPWYAKSEVPDNLKHQRKQKESLQSNINLCYDRGAKTFQA-D*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIEK 434 APA++ + IN H+P Y+ APWYA + P +L HQR ++ ++ YDRGAK A YRKGACENC AM+H +ERPRKR A TN IA DE +++ Sbjct: 33 APAALDEQGNA----INPHIPEYITKAPWYADTGRP-SLAHQRINEQGPHLKLDEWYDRGAKAGPAAKKYRKGACENCGAMTHKMKDCVERPRKRGAKFTNKDIAPDELVQQ 139
BLAST of FC924894 vs. ExPASy Swiss-Prot
Match: SLU7_MAGGR (Pre-mRNA-splicing factor SLU7 OS=Magnaporthe grisea GN=SLU7 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17 Identity = 68/201 (33.83%), Postives = 95/201 (47.26%), Query Frame = 3 Query: 141 EEINTHVPLYMKHAPWYA--KSEVPDNLKHQRKQKESLQSNINLCYDRGAKTF--QAD*YRKGACENCEAMSHNANSIMERPRKRRAILTNMRIAADEKIEKIVM-IQQSMPVMSVRDMKLITKMV*SLMRVTLRILPQVKKGVCGNGSGITG----------------TNRDLRIREDIPKYLLNLDENSAYYDPKIRSM 680 +E N ++P ++ P+YA + E D L+HQR QK+ + YDRG KT A YRKGACENC AM+H + RPR + A T I ADE ++ + M + D + +V ++ K +G I + R LR+RED KYLLNLD +SA YDPK R++ Sbjct: 20 KEENVYIPNFISKRPFYAVDEGENTDYLEHQRIQKKEKDTG---WYDRG-KTLGPAATKYRKGACENCGAMTHKVKDCLSRPRAKGAKWTGRDIKADELVQDVRMGWDAKRDRWNGYDAREYQAVVEDYNKMEELRKEMQAKAAAESGKAIEDGDHYAETSDMSKHQPTSTRQLRLREDTAKYLLNLDLDSAKYDPKTRTI 216 The following BLAST results are available for this feature:
BLAST of FC924894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924894 ID=FC924894; Name=FC924894; organism=Citrus clementina; type=EST; length=725bpback to top |