FC928836

Overview
NameFC928836
Unique NameFC928836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:1395..2132. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50
Identity = 93/135 (68.89%), Postives = 114/135 (84.44%), Query Frame = 3
Query:    6 PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 410
            PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  373 PGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 3
Query:    6 PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 410
            PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  373 PGERPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49
Identity = 92/135 (68.15%), Postives = 111/135 (82.22%), Query Frame = 3
Query:    6 PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 410
            PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCEDSLLAAPI+LDL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  373 PGEQPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48
Identity = 97/138 (70.29%), Postives = 114/138 (82.61%), Query Frame = 3
Query:    3 GPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-AEGE-GKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 410
            GP EHPDHVVVIKYVPYVGDSKRAMDEYTSEI MGG NT+V+HNTCEDSLLA P++LDLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  376 GPDEHPDHVVVIKYVPYVGDSKRAMDEYTSEIMMGGHNTLVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34
Identity = 68/132 (51.52%), Postives = 91/132 (68.94%), Query Frame = 3
Query:    9 GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 404
            G+  DH +VIKY+P VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL  +N +  E
Sbjct:  385 GDKVDHCIVIKYLPAVGDSKVAMDEYYSELMLGGHNKISIHNVCEDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33
Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 3
Query:    9 GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-----AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 404
            G+  DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL  +N +  E
Sbjct:  393 GKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of FC928836 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30
Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 3
Query:    9 GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK-------AEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGL 377
            G   DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CEDSLLA P+++DL+++ E  +R+  +       AE +G F +F+PV + LSY  KAPL  PG   +N L+KQR  LEN LR  +GL
Sbjct:  396 GNKIDHCIVIKYMHAVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of FC928836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN5.883e-5068.89Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MOUSE2.920e-4968.15Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN3.813e-4968.15Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME3.228e-4870.29Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_CANAL7.719e-3451.52Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST6.535e-3351.82Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANGA1.780e-3050.00Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928836 ID=FC928836; Name=FC928836; organism=Citrus clementina; type=EST; length=738bp
ATGGGCCTGGTGAACACCCCGACCACGTTGTGGTCATCAAGTATGTGCCA
TATGTTGGCGATAGCAAGAGAGCCATGGATGAGTACACATCAGAAATTTT
CATGGGTGGCAAGAACACCATTGTGCTGCACAACACGTGTGAGGACTCTC
TTTTGGCTGCTCCAATCGTTCTAGATTTGGTTCTGCTGGCTGAACTCAGC
ACCAGGATCCAGCTCAAAGCTGAAGGAGAGGGCAAATTCCACTCTTTCCA
CCCTGTGGCTACAATTCTCAGCTACCTCACCAAGGCTCCTCTGGTCCCTC
CAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTTGAG
AACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGATTTT
GGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGTTTT
CCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACTGAT
TGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTGTCCTGTAT
GTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATTGCC
TTTGTAGCTCATTTCGGAGCATGAAATCTCTTGTATTGCAAGTAGATAAT
ATATGGAAGTTCATAAATAACTGTATTGCGGCAAATTTGAATCTCATCTA
AATCCTTACTTCTTAAAAAAAAAAAAAAAAAAAAAAAA
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