FC928843

Overview
NameFC928843
Unique NameFC928843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length820
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15408 contig Ccv1_Contig15408:42..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.663e-14
Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  250 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTE 630
            E ++ + P V +        T E+L  +DGS   KP  +AI  ++YDV   + +YGPG  Y  FAG+DA+RA     F E  L     GL   EL +++DW   +  +Y  VG +      +DG  + E T+
Sbjct:   82 EHLQAINPEVDVAAGGKHVFTPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSDGQPTAELTD 213          
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: CB5D2_MOUSE (Cytochrome b5 domain-containing protein 2 OS=Mus musculus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.289e-13
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 1
Query:  301 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTE 630
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  DI+GL   E+  L +W   +   YV VG +       DG  + E T+
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDINGLSSSEILTLHNWLSFYEKNYVFVGRLVGRFYRKDGLPTSELTQ 150          
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 1
Query:  250 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTE 630
            E ++ + P V +        T E+L  +DG+   KP+ +AI  ++Y+V   + +YGPG  Y  FAG+DA+RA     F+E  L     GL   EL +++DW   +  +Y  VG +      ++G  + E T+
Sbjct:   82 EHIQAINPEVDVAAGGKHVFTPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSEGQPTPELTD 213          
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: DAP1_YEAST (Damage response protein 1 OS=Saccharomyces cerevisiae GN=DAP1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  274 PVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE---EKDLTGDISGLGPF---ELEALQDWEYKFMSKYVKVGSI 579
            PV  G      L +++G D +K + +AI+ ++YD ++ R FYGP GPY  FAG DASR LA  SF+    KD    I  L      +++AL +W+  F +KY  +G++
Sbjct:   38 PVVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTL 144          
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: CB5D2_RAT (Cytochrome b5 domain-containing protein 2 OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13
Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1
Query:  301 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTE 630
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  D++GL   E+  L +W   +   YV VG +       DG  + E T+
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLIGRFYGKDGLPTSELTQ 150          
BLAST of FC928843 vs. ExPASy Swiss-Prot
Match: CB5D2_HUMAN (Cytochrome b5 domain-containing protein 2 OS=Homo sapiens GN=CYB5D2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.222e-11
Identity = 39/115 (33.91%), Postives = 55/115 (47.83%), Query Frame = 1
Query:  301 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGSIKSTVPVTDGASSGESTEPKEGV 645
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA       E  L  D+S L   E+  L +W   +   YV VG +       DG  +   T+ +  +
Sbjct:   41 EELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGRFYGEDGLPTPALTQVEAAI 155          
The following BLAST results are available for this feature:
BLAST of FC928843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CB5D2_CAEBR3.663e-1433.33Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_MOUSE5.289e-1337.27Cytochrome b5 domain-containing protein 2 OS=Mus m... [more]
CB5D2_CAEEL6.907e-1331.06Cytochrome b5 domain-containing protein 2 homolog ... [more]
DAP1_YEAST9.021e-1337.96Damage response protein 1 OS=Saccharomyces cerevis... [more]
CB5D2_RAT9.021e-1336.36Cytochrome b5 domain-containing protein 2 OS=Rattu... [more]
CB5D2_HUMAN2.222e-1133.91Cytochrome b5 domain-containing protein 2 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928843 ID=FC928843; Name=FC928843; organism=Citrus clementina; type=EST; length=820bp
TTTAAGACCAAACCCCTACAGACTCTGAGTGGATAATACCAAAGGGGACC
GGGGAAAAAAAAAATCTTGACCTCCGTGATGGCTCTGCAACTATGGGAGA
CTCTAAAGGAGGCGATAACAGCGTACACGGGGCTCTCCCCGGCGGCGTTT
TTTACAGTTGTTGCGTTGCTGTGGGCCATATACTATGTTCTGTCGGGAAT
GTTTGGTTCGTCCGATAATCATCATCAGCAGAGATCGAGGGAGTACGAGG
AACAGATGGAGCCTCTGCCACCGCCTGTTCAGCTAGGCGAGATTACCGAG
GAGGAGCTCAAACAGTACGATGGCTCCGATTCCAAAAAGCCCCTTCTCAT
GGCCATCAAGAGCCAGATCTACGATGTCTCTCAGAGCAGGATGTTTTATG
GACCTGGTGGGCCATATGCGTTGTTTGCTGGAAAGGATGCTAGCAGGGCC
CTTGCCAAGATGTCTTTTGAGGAAAAAGATTTAACTGGTGATATCTCTGG
TCTTGGTCCATTTGAGTTGGAGGCATTGCAGGACTGGGAGTATAAGTTCA
TGAGCAAGTATGTTAAGGTTGGATCTATCAAGTCGACAGTTCCAGTAACA
GATGGAGCCTCCTCTGGTGAATCCACTGAGCCTAAAGAAGGAGTTGTTGA
TACACCTGCAGAAAGTAAAGGAGTTGTTGATACACCTGCAGAAACTAAAG
AAGTAGATATCGCTAAGCCTGCTGAATATGGTCCGTCAGAAACTGCAGCC
GCTGGACCTGAGGCAACCCCATCTTCTGATGATACTAAGAAGGAGTAAGC
CGAACCCCATCTGTTGATGA
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