FC928844

Overview
NameFC928844
Unique NameFC928844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP3_YARLI (FK506-binding protein 3 OS=Yarrowia lipolytica GN=FPR3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDI--QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            +L+ GVK + +T      A  G K+ V Y GKL +G VFDS+  +G P  F +G G VI+GWD G+ GM V  +R++ IP  + YG Q   P IP  + L FD ++V +
Sbjct:  300 QLEGGVKIEDRTVGEGPSAKVGSKVGVRYVGKLANGKVFDSN-SKGKPFYFSVGKGEVIRGWDIGVQGMKVKGERRIIIPPGMAYGKQ-KLPGIPPNSQLTFDVKVVNI 406          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP5_DICDI (FK506-binding protein 5 OS=Dictyostelium discoideum GN=fkbp5 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTD----GTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPAS 458
            GD++ + Y G L +    G++FDS+ +   P  F +G G VIKGWD G++GM    KR L IP++L YG +G   TIP    LIFD E+     K  S
Sbjct:  178 GDRVSIKYAGWLENNQRVGSLFDSNLQSETPFRFVVGEGKVIKGWDLGVIGMRKSAKRILVIPSELAYGKKGH-STIPPNTNLIFDLEVTGSKKKEGS 274          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_GIBZE (FK506-binding protein 1 OS=Gibberella zeae GN=FPR1 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 3
Query:  177 GDKIKVHYRGKL-----TDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTEL 431
            G K+ + Y G L     T G  FD+S  RGD +   +G G VIKGWD+G+  M +GEK  L I    GYG +G P  IP  +TLIFD EL
Sbjct:   19 GQKVTMEYTGWLQKEDGTKGDQFDTSVGRGDFV-VNIGVGQVIKGWDEGVTQMKLGEKATLHISPDYGYGPRGFPGAIPPNSTLIFDVEL 107          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_ASPOR (FK506-binding protein 1 OS=Aspergillus oryzae GN=fpr1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTD---------GTVFDSSFERG-DPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GDK+ +HY G + D         G  FDSS   G  P+   +G G VIKGWD+G++ M +GEK  L I    GYG + +   IP  +TLIF+ EL+ +N
Sbjct:   19 GDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNIGQGKVIKGWDEGVMQMSLGEKSTLTITPDYGYGDKAA-GKIPANSTLIFEVELLKIN 116          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB1B_ASPFU (FK506-binding protein 1B OS=Aspergillus fumigatus GN=fpr1B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTD--------GTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            GD ++++Y G L D        G  FDSS  RG P++  +G+G VI+GWD+G+  M +GEK  L +  +  YG +G P  IP  A+L+F+ EL+ +
Sbjct:   20 GDPVELNYTGYLYDESNPDHHKGKEFDSSKRRG-PLKATIGAGDVIRGWDEGVRQMSLGEKAILTMSGEYAYGEKGFPGLIPPNASLVFEVELLKI 114          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBA_BUCAP (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fkpA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            K  +I VHY+G L +GT FDSS++RG PI   L    VI GW +GL  +  G K KL IP  LGYG+      IP  + LIFD EL+ +
Sbjct:  164 KNAEITVHYKGSLINGTEFDSSYKRGKPITLMLKD--VILGWQEGLKYIKKGGKIKLIIPPNLGYGS-NRINEIPANSILIFDIELLDI 249          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP7_HUMAN (FK506-binding protein 7 OS=Homo sapiens GN=FKBP7 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 3
Query:   66 FLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFER--GDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQG 380
            +L  L T     K     E++I V ++P+ C   + KGD +  HY G L  DG+ F  S  +  G P  F LG G VIKG D  +  MC GEKRK+ IP    YG +G
Sbjct:   16 YLWGLFTAQRQKKEESTEEVKIEVLHRPENCSKTSKKGDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEG 123          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBA_NEIMB (Probable FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Neisseria meningitidis serogroup B GN=fkpA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 3
Query:  165 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            Q  K D + V Y G+L DGTVFDSS   G P+ F L    VI GW +G+  +  G +    IP+ L Y  QG+   I   ATL+FD +LV +
Sbjct:  163 QPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPL--SQVIPGWTEGVQLLKEGGEATFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKI 252          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBA_BUCAI (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fkpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  183 KIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV-TVNG 446
            KI VHY+G L +G  FD+S++RG P+   L    VI GW +GL  +  G K KL IP  L YG +     IP  +TLIFD EL+  VNG
Sbjct:  155 KITVHYKGTLINGLEFDNSYKRGRPVSLRLKD--VILGWKEGLKYIKKGGKIKLVIPPNLAYGTE-EVNGIPANSTLIFDIELLDVVNG 240          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP2_ARATH (Probable FKBP-type peptidyl-prolyl cis-trans isomerase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g43560 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 43/121 (35.54%), Postives = 64/121 (52.89%), Query Frame = 3
Query:  132 GVKYKPKTCDIQAHKGD------KIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGY--GAQGSP--PTIPGGATLIFDTELVTVNGKPASGE 464
            G++YK    DI+  +G       ++  +Y   +  G +FDSS E+G P  F +GSG VIKG D+G+L M  G KR+L IP  L +  G   +P  P +   + +IFD  L  + G  +  E
Sbjct:  107 GLQYK----DIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEFIPGLDSEEE 223          
The following BLAST results are available for this feature:
BLAST of FC928844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP3_YARLI8.941e-1441.28FK506-binding protein 3 OS=Yarrowia lipolytica GN=... [more]
FKBP5_DICDI4.437e-1341.84FK506-binding protein 5 OS=Dictyostelium discoideu... [more]
FKBP_GIBZE7.569e-1346.67FK506-binding protein 1 OS=Gibberella zeae GN=FPR1... [more]
FKBP_ASPOR1.686e-1241.41FK506-binding protein 1 OS=Aspergillus oryzae GN=f... [more]
FKB1B_ASPFU2.876e-1239.58FK506-binding protein 1B OS=Aspergillus fumigatus ... [more]
FKBA_BUCAP6.407e-1247.19FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP7_HUMAN8.368e-1239.81FK506-binding protein 7 OS=Homo sapiens GN=FKBP7 P... [more]
FKBA_NEIMB1.093e-1142.39Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]
FKBA_BUCAI1.864e-1147.19FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP2_ARATH7.084e-1135.54Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928844 ID=FC928844; Name=FC928844; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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