FC928844

Overview
NameFC928844
Unique NameFC928844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP9_HUMAN (FK506-binding protein 9 OS=Homo sapiens GN=FKBP9 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21
Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + I   YKP  C + + KGD +K HY   L DGT+ DS++  G      LGSG V+ G D GL  MCVGEKR + IP  LGYG  G    +PG A L+FD EL+
Sbjct:  371 ISITSHYKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGSGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELL 474          

HSP 2 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + I  K  P+ C+  +  GD ++ HY G L DGT+FDSS+ R    +  +G G+VI G D+GLLG+C+GEKR++ +P  LGYG +G    IPG A L+FD  ++
Sbjct:  260 ISIENKVVPENCERISQSGDFLRYHYNGTLLDGTLFDSSYSRNRTFDTYIGQGYVIPGMDEGLLGVCIGEKRRIVVPPHLGYGEEGR-GNIPGSAVLVFDIHVI 362          

HSP 3 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            ++QI   +KP +C       D ++ HY G   DGT+FDSS  R    +  +G G +I G D+GLLGMCVGEKR + IP  L YG  G    IPG A+L+FD  L+ ++
Sbjct:  147 QVQIHTYFKPPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDIPGQASLVFDVALLDLH 254          

HSP 4 Score: 92.0485 bits (227), Expect = 3.508e-18
Identity = 46/111 (41.44%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  108 GDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            G   ELQI  ++ P  C      GD ++ HY G   DG  FDSS++R       +G G +I G DQ L+GMCV E+R +KIP KL YG +G    IP  + L FD  L+ +
Sbjct:   31 GSDAELQIERRFVPDECPRTVRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLITGMDQALVGMCVNERRFVKIPPKLAYGNEGVSGVIPPNSVLHFDVLLMDI 141          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B GN=fbp PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3
Query:  165 QAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            +A KG +I VHY G L +GT FDSS +R  P+   LG G VIKGWD+G  GM  G KRKL IP+++GYGA G+   IP  ATLIF+ EL+ V
Sbjct:   16 EAVKGKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEVELLKV 107          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP9_BOVIN (FK506-binding protein 9 OS=Bos taurus GN=FKBP9 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + I  K  P+ C+ ++  GD ++ HY G L DGT FDSS+ R    +  +G G+VI G D+GLLG+C+GEKR++ +P  LGYG +G    IPG A L+FD  ++
Sbjct:  264 ISIENKVVPENCERRSQSGDFLRYHYNGTLLDGTFFDSSYSRNRTFDTYIGQGYVIPGIDEGLLGVCIGEKRRIVVPPHLGYGEEGR-GNIPGSAVLVFDIHVI 366          

HSP 2 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 48/104 (46.15%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + I   YKP  C + + KGD +K HY   L DGT+ DS++  G      LG G V+ G D GL  MCVGEKR + IP  LGYG  G    +PG A L+FD EL+
Sbjct:  375 ISITSHYKPPDCSVLSKKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGFGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELL 478          

HSP 3 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            ++QI   +KP +C       D ++ HY G   DGT+FDSS  R    +  +G G +I G D+GLLGMCVGEKR + IP  L YG  G    IPG A+L+FD  L+ ++
Sbjct:  151 QVQIHTYFKPPSCPRTIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDIPGQASLVFDVALLDLH 258          

HSP 4 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  108 GDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            G  +ELQI  ++ P+ C      GD ++ HY G   DG  FDSS++R       +G G +I G DQ L+GMCV E+R +KIP KL YG+ G    IP  + L FD  L+ +
Sbjct:   35 GSDSELQIERRFVPEECPRTVRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLIAGMDQALVGMCVNERRFVKIPPKLAYGSDGVSGVIPPDSVLHFDVLLMDI 145          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB14_MOUSE (FK506-binding protein 14 OS=Mus musculus GN=Fkbp14 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFER--GDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGE 464
            E++I V  KP  C  +   GD + VHY G L  DG++F S+ +   G P+ F LG   V+KGWDQGL GMCVGEKRKL +P  LGYG +G    IP  +TLIF+ +L+ +   P S E
Sbjct:   26 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPVWFTLGILEVLKGWDQGLKGMCVGEKRKLTVPPALGYGKEGK-GKIPPESTLIFNIDLLEIRNGPRSHE 142          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB11_MOUSE (FK506-binding protein 11 OS=Mus musculus GN=Fkbp11 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   36 SVLNIAAAISFLLVLSTLVSANKSGDVTE-----LQIGVKYKP-KTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            S L +   +  LL+ S  V   ++G  TE     LQ+    +P ++C   A  GD + +HY G L DG + D+S  R DP+  ELG   VI G +Q LL MCVGEKR+  IP+ L YG +G PP+IP  A + +D EL+ +
Sbjct:    4 SPLLLPLQLLLLLLFSGAVCRAEAGPETESPVRTLQVETLVQPPESCTESAAIGDTLHIHYTGSLVDGRIIDTSLTR-DPLVIELGQKQVIPGLEQSLLDMCVGEKRRAVIPSHLAYGKRGYPPSIPADAVVQYDVELIAL 143          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_SCHPO (FK506-binding protein OS=Schizosaccharomyces pombe GN=SPBC839.17c PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPA 455
            GD+I +HY G LT+G  FDSS +RG P    +G G +I+GWD+G+  M +GEK KL I    GYG +G P  IP  +TL+FD EL+ +N K A
Sbjct:   20 GDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLAINDKKA 112          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_CANGA (FK506-binding protein 1 OS=Candida glabrata GN=FPR1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            +GD + +HY G L +G  FDSS +RG P +  +G G VIKGWD G+  + VGEK +L IP    YG +G P  IP  ATLIFD EL+ VN
Sbjct:   25 QGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDAGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNATLIFDVELLKVN 114          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB14_PONAB (FK506-binding protein 14 OS=Pongo abelii GN=FKBP14 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFER--GDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGE 464
            E++I V  KP  C  +   GD + VHY G L  DG++F S+ +   G PI F LG    +KGWDQGL GMCVGEKRKL IP  LGYG +G    IP  +TLIF+ +L+ +   P S E
Sbjct:   26 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK-GKIPPESTLIFNIDLLEIRNGPRSHE 142          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB14_HUMAN (FK506-binding protein 14 OS=Homo sapiens GN=FKBP14 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 57/118 (48.31%), Postives = 72/118 (61.02%), Query Frame = 3
Query:  120 ELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFER--GDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGE 464
            E++I V  KP  C  +   GD + VHY G L  DG++F S+ +   G PI F LG    +KGWDQGL GMCVGEKRKL IP  LGYG +G    IP  +TLIF+ +L+ +   P S E
Sbjct:   26 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK-GKIPPESTLIFNIDLLEIRNGPRSHE 142          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB10_MOUSE (FK506-binding protein 10 OS=Mus musculus GN=Fkbp10 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20
Identity = 48/135 (35.56%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   30 FNSVLNIAAAISFLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + +V+   A++ F ++L  + +   +  +  L++     P+ C  +A  GD ++ HY G L DGT+FDSS+ R       +G G++I G DQGL G C+GE+R++ +P  L YG  G+   IPG A LIFD  ++
Sbjct:  241 YGTVIPPQASLVFYVLLLDVHNPKDTVQLETLEL-----PQGCVRRAVAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYVGQGYIIPGMDQGLQGACIGERRRITVPPHLAYGENGTGDKIPGSAVLIFDVHVI 370          

HSP 2 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 3
Query:   27 SFNSVLNIAAAISFLLVLSTLVS----ANKSGDVTELQIGVKYK-PKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPASGEKT 470
            S +  L+    +  LL+L TL      A+ +G   E  +  +Y  P+ C  +   GD ++ HY G   DG  FDSS++R   +   +G G +I G D+GL+GMCV E+R+L +P  LGYG+ G    IP  ATL FD  L+ V  K  + + T
Sbjct:    6 SSSHTLHRVRILPLLLLLQTLERGLGRASPAGAPLEDVVIERYHIPRACPREVQMGDFVRYHYNGTFEDGKKFDSSYDRSTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGVAGLIPPDATLYFDVVLLDVWNKADTVQST 158          

HSP 3 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            +Q  +  +P  C       D ++ HY G L DGT FD+S+ RG   +  +GSG +IKG DQGLLGMC GEKRK+ IP  L YG +G    IP  A+L+F   L+ V+
Sbjct:  155 VQSTILLRPPYCPRMVQNSDFVRYHYNGTLLDGTGFDNSYSRGGTYDTYIGSGWLIKGMDQGLLGMCPGEKRKIIIPPFLAYGEKGYGTVIPPQASLVFYVLLLDVH 261          

HSP 4 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  147 PKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 437
            P+ C+  +  GD I+ HY   L DGT   SS +   P E  LG+  VI+G D+GL GMCVGE+R+L +P  L +G  G+   +PG A L+F+ ELV+
Sbjct:  388 PENCNETSKIGDFIRYHYNCSLLDGTRLFSSHDYEAPQEITLGANKVIEGLDRGLQGMCVGERRQLIVPPHLAHGENGA-RGVPGSAVLLFEVELVS 483          
The following BLAST results are available for this feature:
BLAST of FC928844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP9_HUMAN4.427e-2147.12FK506-binding protein 9 OS=Homo sapiens GN=FKBP9 P... [more]
FKBP_NEIMB5.782e-2155.43FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP9_BOVIN5.782e-2144.23FK506-binding protein 9 OS=Bos taurus GN=FKBP9 PE=... [more]
FKB14_MOUSE1.682e-2047.46FK506-binding protein 14 OS=Mus musculus GN=Fkbp14... [more]
FKB11_MOUSE2.197e-2040.43FK506-binding protein 11 OS=Mus musculus GN=Fkbp11... [more]
FKBP_SCHPO3.748e-2049.46FK506-binding protein OS=Schizosaccharomyces pombe... [more]
FKBP_CANGA4.895e-2051.11FK506-binding protein 1 OS=Candida glabrata GN=FPR... [more]
FKB14_PONAB4.895e-2048.31FK506-binding protein 14 OS=Pongo abelii GN=FKBP14... [more]
FKB14_HUMAN4.895e-2048.31FK506-binding protein 14 OS=Homo sapiens GN=FKBP14... [more]
FKB10_MOUSE6.392e-2035.56FK506-binding protein 10 OS=Mus musculus GN=Fkbp10... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928844 ID=FC928844; Name=FC928844; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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