FC928844

Overview
NameFC928844
Unique NameFC928844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB10_HUMAN (FK506-binding protein 10 OS=Homo sapiens GN=FKBP10 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20
Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            +Q+    +P  C      GD ++ HY G L DGT FD+S+ +G   +  +GSG +IKG DQGLLGMC GE+RK+ IP  L YG +G    IP  A+L+F   L+ V+
Sbjct:  156 VQVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTVIPPQASLVFHVLLIDVH 262          

HSP 2 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 3
Query:   30 FNSVLNIAAAISFLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + +V+   A++ F ++L  + +   +  +  L++     P  C  +A  GD ++ HY G L DGT+FDSS+ R       +G G++I G DQGL G C+GE+R++ IP  L YG  G+   IPG A LIF+  ++
Sbjct:  242 YGTVIPPQASLVFHVLLIDVHNPKDAVQLETLEL-----PPGCVRRAGAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNVHVI 371          

HSP 3 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  108 GDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            G + ++ I   + P+ C  +   GD ++ HY G   DG  FDSS++R   +   +G G +I G D+GL+GMCV E+R+L +P  LGYG+ G    IP  ATL FD  L+ V  K
Sbjct:   39 GPLEDVVIERYHIPRACPREVQMGDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYFDVVLLDVWNK 152          

HSP 4 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 3
Query:   87 LVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 437
            ++  +   DV E++  +    +TC+     GD ++ HY   L DGT   +S + G P E  LG+  VI+G D GL GMCVGE+R+L +P  L +G  G+   +PG A L+F+ ELV+
Sbjct:  370 VIDFHNPADVVEIRT-LSRPSETCNETTKLGDFVRYHYNCSLLDGTQLFTSHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGA-RGVPGSAVLLFEVELVS 484          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB11_HUMAN (FK506-binding protein 11 OS=Homo sapiens GN=FKBP11 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   69 LLVLSTLVSANKSGDVTE-----LQIGVKYKP-KTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            LL+LS  V   ++G  TE     LQ+    +P + C   A  GD + +HY G L DG + D+S  R DP+  ELG   VI G +Q LL MCVGEKR+  IP+ L YG +G PP++P  A + +D EL+ +
Sbjct:   15 LLLLSAAVCRAEAGLETESPVRTLQVETLVEPPEPCAEPAAFGDTLHIHYTGSLVDGRIIDTSLTR-DPLVIELGQKQVIPGLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPADAVVQYDVELIAL 143          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB10_BOVIN (FK506-binding protein 10 OS=Bos taurus GN=FKBP10 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  123 LQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            +Q+    +P  C       D ++ HY G L DGT FD+S+ +G   +  +GSG +IKG DQGLLGMC GE+RK+ IP  L YG +G    IP  A+L+F   L+ V+
Sbjct:  157 VQVSTLLRPPHCPRMVQDSDFVRYHYNGTLLDGTAFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIVIPPFLAYGEKGYGTVIPSQASLVFHVLLIDVH 263          

HSP 2 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 3
Query:   30 FNSVLNIAAAISFLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            + +V+   A++ F ++L  + +   +  +  L++     P  C  +A  GD ++ HY G L DGT+FDSS+ R       +G G++I G DQGL G C+GE+R++ IP  L YG  G+   IPG A LIFD  ++
Sbjct:  243 YGTVIPSQASLVFHVLLIDVHNPKDTVQLETLEL-----PPGCVRRAVAGDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYVGQGYIIPGMDQGLQGSCMGERRRITIPPHLAYGENGTGDKIPGSAVLIFDVHVI 372          

HSP 3 Score: 92.4337 bits (228), Expect = 2.686e-18
Identity = 46/114 (40.35%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  108 GDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            G + ++ I   + P+ C  +   GD ++ HY G   DG  FDSS++R   +   +G G +I G D+GL+GMCV E+R+L +P  LGYG+ G    IP  ATL FD  L+ V  K
Sbjct:   40 GPLEDVVIERYHIPRVCPREVQMGDFVRYHYNGTFEDGKKFDSSYDRHTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGVAGLIPPDATLYFDVVLLDVWNK 153          

HSP 4 Score: 82.8037 bits (203), Expect = 2.128e-15
Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  150 KTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 437
            +TC+  A  GD +  HY   L DGT   SS + G P E  LG+  VI+G D GL GMCVGE+R+L +P  L +G  G+   +PG A L+F+ ELV+
Sbjct:  391 ETCNETAKLGDFVHYHYNCSLLDGTRLFSSHDYGAPQEATLGAHKVIEGLDTGLQGMCVGERRQLVVPPHLAHGESGA-RGVPGSAVLLFEVELVS 485          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBY_HAEIN (Probable FKBP-type peptidyl-prolyl cis-trans isomerase OS=Haemophilus influenzae GN=HI0574 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19
Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  102 KSGDVTELQIGVKYKPKTCDIQAHKGDKIK------VHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            K  DV   Q G+ YK ++    A KGD IK      VHY GKL +G VFDSS ERG P+EF+L    VIKGW +GL  +  G K +  I  +LGYG QG+  +IP  +TLIFD E++ VN K
Sbjct:  123 KGKDVKTTQSGLMYKIES----AGKGDTIKSTDTVKVHYTGKLPNGKVFDSSVERGQPVEFQLDQ--VIKGWTEGLQLVKKGGKIQFVIAPELGYGEQGAGASIPPNSTLIFDVEVLDVNPK 238          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_YEAST (FK506-binding protein 1 OS=Saccharomyces cerevisiae GN=FPR1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L +G  FDSS +RG P +  +G G VIKGWD G+  + VGEK +L IP    YG +G P  IP  +TL+FD EL+ VN
Sbjct:   26 GDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 114          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_RHIOR (FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP4 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            G ++ + Y GKLT+G VFD +   G P  F LG G VIKGWD G+ GM  G +RKL IPA L YG +G+PP IP  ATL+FD +L+++
Sbjct:  295 GQRVGMRYIGKLTNGKVFDKNVS-GKPFSFLLGRGEVIKGWDLGIAGMKAGGERKLTIPAPLAYGKRGAPPDIPKNATLVFDVKLLSM 381          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 56/129 (43.41%), Postives = 72/129 (55.81%), Query Frame = 3
Query:   51 AAAISFLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVT 437
            AA +      S++V+        +L +G    PK+       G K+ V Y GKLT+G  FDSS     P  F +G   VI+GWD G+  M VG KR+L IPA L YG  G+PP+IP  ATLIFD ELV+
Sbjct:  242 AAVVEKKKPTSSVVTLPSGLQYEDLVVGSGPSPKS-------GKKVGVKYIGKLTNGKTFDSSLRT--PFTFRIGIREVIRGWDIGVASMKVGGKRRLTIPADLAYGRSGAPPSIPPNATLIFDVELVS 361          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP_KLULA (FK506-binding protein 1 OS=Kluyveromyces lactis GN=FPR1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L +G  FDSS +RG P +  +G G VIKGWD  +  + VGEK +L IP    YG +G P  IP  ATL+FD EL+ +N
Sbjct:   26 GDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDAAIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNATLVFDVELLKIN 114          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  171 HKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGKPAS 458
            H G  + +HY G+L DGT FDSS  R +P EF LG G+VIK +D G+  M +GE+  L       YGA GSPP IP  ATLIF+ E++   G+  S
Sbjct:   30 HSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGWKGEDLS 125          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB1A_EMENI (FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.231e-19
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            GD + +HY G L DG+ FDSS +R      ++G G VIKGWD+G+L + VGEK KL       YGA+G PP IP  ATL F+ EL+ +N
Sbjct:   20 GDTVSIHYTGTLADGSKFDSSRDRPGTFVTQIGVGRVIKGWDEGVLQLSVGEKAKLICTPDYAYGARGFPPVIPPNATLTFEVELLKIN 108          
The following BLAST results are available for this feature:
BLAST of FC928844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKB10_HUMAN6.392e-2043.93FK506-binding protein 10 OS=Homo sapiens GN=FKBP10... [more]
FKB11_HUMAN8.349e-2042.31FK506-binding protein 11 OS=Homo sapiens GN=FKBP11... [more]
FKB10_BOVIN8.349e-2042.99FK506-binding protein 10 OS=Bos taurus GN=FKBP10 P... [more]
FKBY_HAEIN1.090e-1948.36Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]
FKBP_YEAST2.429e-1949.44FK506-binding protein 1 OS=Saccharomyces cerevisia... [more]
FKBP4_RHIOR2.429e-1952.27FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP4_DICDI4.143e-1943.41FK506-binding protein 4 OS=Dictyostelium discoideu... [more]
FKBP_KLULA5.412e-1948.31FK506-binding protein 1 OS=Kluyveromyces lactis GN... [more]
FKB59_DROME5.412e-1947.92FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKB1A_EMENI9.231e-1949.44FK506-binding protein 1A OS=Emericella nidulans GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928844 ID=FC928844; Name=FC928844; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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