FC928844

Overview
NameFC928844
Unique NameFC928844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15007 contig Ccv1_Contig15007:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_EMENI (FK506-binding protein 4 OS=Emericella nidulans GN=fpr4 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A  G+ + + Y GKL +G VFDS+ ++G P  F+LG G VIKGWD G+ GM VG +R++ IP+ L YG +G  P IPG + LIFD +L+ +
Sbjct:  389 AASGNTVAMRYIGKLENGKVFDSN-KKGKPFTFKLGKGEVIKGWDIGVAGMAVGGERRITIPSHLAYGKKG-VPGIPGNSKLIFDVKLLEI 477          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP7_MOUSE (FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 58/148 (39.19%), Postives = 77/148 (52.03%), Query Frame = 3
Query:   33 NSVLNIAAAISFLLVLSTLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSF--ERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQG-SPPTIPGGATLIFDTELVTVNGKPASGE 464
            N +  +A  +S L   S      K     E++I V ++P+ C   + KGD +  HY G L  DG+ F  S   + G P  F LG GHVIKG D  ++ MC GEKRK+ IP    YG +G +   IP  ATL+F+ EL  V   P S E
Sbjct:    2 NLLFRLAVFLS-LWCCSDAQGQTKEESTEEVKIEVLHRPENCSKTSRKGDLLNAHYDGYLAKDGSKFYCSRTQDEGHPKWFVLGVGHVIKGLDIAMMDMCPGEKRKVIIPPSFAYGKEGYAEGKIPPNATLMFEIELYAVTKGPRSIE 148          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVNGK 449
            GD++ VHY GKL +G  FDSS +R +P  F +G G VIK WD G+  M  GE   L    +  YGA GS P IP  ATL F+ EL+   G+
Sbjct:   50 GDRVYVHYNGKLANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDFKGE 140          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis GN=FPR4 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 3
Query:  177 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            G K+ + Y GKLT+G VFD     G P  F+LG G VIKGWD+G+ GM VG +R+L  P KL YG Q   P IP  +TL+FD +LV +
Sbjct:  289 GQKVGMRYVGKLTNGKVFDQCTS-GKPFYFKLGKGEVIKGWDEGVKGMRVGAERRLTCPPKLAYGNQ-KIPGIPANSTLVFDVKLVEI 374          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_CRYNE (FK506-binding protein 4 OS=Cryptococcus neoformans GN=FPR4 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            A  G ++ + Y GKLT+G  FD++   G P  F LG G VI+GWD+GL GM VG +R+L IPA L YG Q   P IP  +TL FD +LV++N
Sbjct:  316 AKTGKRLGMRYIGKLTNGKQFDANTS-GKPFSFVLGKGEVIRGWDEGLAGMAVGGERRLTIPAALAYGNQ-KIPGIPKNSTLKFDVKLVSIN 405          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB2A_RHIOR (FK506-binding protein 2A OS=Rhizopus oryzae GN=FKBP2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = 3
Query:   66 FLLVLS--TLVSANKSGDVTELQIGVKYKPKTCDIQAHKGDKIKVHYRGKLT-DGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTVN 443
            FLL LS  T++ A KS            KP+ C ++A     +++HYR ++      F+S++ R  P+E +LG+G+++KG + G+ GMC GE R+L IP    YGA G P  +P    ++ D E+V VN
Sbjct:    9 FLLTLSFITIIYAAKSESTIN-------KPEKCGLKASSSSTVRIHYRSRVWGQEEYFESTYIREAPLEVKLGNGNLLKGIEDGIHGMCTGEIRRLLIPPNQAYGAIGIPNLVPPNTAIVVDVEMVNVN 130          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKB1A_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos taurus GN=FKBP1A PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 3
Query:  174 KGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELV 434
            +G    VHY G L DG  FDSS +R  P +F LG   VI+GW++G+  M VG++ KL I     YGA G P  IP  ATLIFD EL+
Sbjct:   19 RGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELL 105          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPOR (FK506-binding protein 4 OS=Aspergillus oryzae GN=fpr4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 3
Query:  168 AHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            A  G+ + + Y GKL DG VFD++ ++G P  F+LG G VIKGWD G+ GM VG +R++ IP  L YG + + P IPG + LIFD +L+ +
Sbjct:  381 AKAGNTVAMRYIGKLEDGKVFDAN-KKGKPFTFKLGKGEVIKGWDIGVAGMAVGGERRISIPPHLAYGKK-ALPGIPGNSKLIFDVKLLEI 469          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBB_SHIFL (FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase OS=Shigella flexneri GN=fklB PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  180 DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            D+++VHY GKL DGTVFDSS  RG+P EF +    VI GW + L  M VG K +L IP +L YG +G+  +IP  +TL+F+ EL+ +
Sbjct:  121 DRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNG--VIPGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEI 205          
BLAST of FC928844 vs. ExPASy Swiss-Prot
Match: FKBB_ECOLI (FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase OS=Escherichia coli (strain K12) GN=fklB PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  180 DKIKVHYRGKLTDGTVFDSSFERGDPIEFELGSGHVIKGWDQGLLGMCVGEKRKLKIPAKLGYGAQGSPPTIPGGATLIFDTELVTV 440
            D+++VHY GKL DGTVFDSS  RG+P EF +    VI GW + L  M VG K +L IP +L YG +G+  +IP  +TL+F+ EL+ +
Sbjct:  121 DRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNG--VIPGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEI 205          
The following BLAST results are available for this feature:
BLAST of FC928844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKBP4_EMENI3.878e-1748.35FK506-binding protein 4 OS=Emericella nidulans GN=... [more]
FKBP7_MOUSE5.065e-1739.19FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 P... [more]
FKBP5_SAIBB6.615e-1747.25FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]
FKBP4_USTMA8.640e-1751.14FK506-binding protein 4 OS=Ustilago maydis GN=FPR4... [more]
FKBP4_CRYNE8.640e-1750.00FK506-binding protein 4 OS=Cryptococcus neoformans... [more]
FKB2A_RHIOR8.640e-1736.43FK506-binding protein 2A OS=Rhizopus oryzae GN=FKB... [more]
FKB1A_BOVIN8.640e-1749.43Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos ... [more]
FKBP4_ASPOR1.474e-1647.25FK506-binding protein 4 OS=Aspergillus oryzae GN=f... [more]
FKBB_SHIFL1.474e-1649.43FKBP-type 22 kDa peptidyl-prolyl cis-trans isomera... [more]
FKBB_ECOLI1.474e-1649.43FKBP-type 22 kDa peptidyl-prolyl cis-trans isomera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AH10RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928844 ID=FC928844; Name=FC928844; organism=Citrus clementina; type=EST; length=740bp
GACAAACAGAGAGAATTGTGAAGATGAGTTTCAACTCAGTATTGAATATC
GCCGCTGCAATTTCGTTCCTTTTGGTTCTTTCGACGTTAGTTTCTGCTAA
CAAGTCAGGCGATGTAACAGAGTTACAGATTGGCGTAAAGTACAAGCCAA
AAACCTGTGACATTCAGGCTCACAAAGGTGATAAAATCAAAGTACATTAC
CGGGGAAAACTGACTGATGGAACTGTTTTTGATTCCAGTTTTGAAAGAGG
TGATCCCATTGAATTTGAGCTTGGCAGCGGTCATGTAATCAAAGGATGGG
ACCAAGGACTTTTGGGAATGTGCGTCGGTGAGAAGCGAAAGTTGAAAATT
CCTGCAAAGCTTGGTTATGGGGCCCAGGGTTCTCCCCCTACCATCCCAGG
TGGAGCAACATTGATCTTTGACACCGAGCTTGTAACAGTAAATGGGAAAC
CAGCAAGCGGAGAGAAAACTGAAGATGAGCTATGATTACCTCTCGATTGA
GCAGATTTACCTAAGTCATTCCTGTTGCTTTTAATGTATCGGCATAAACC
AGGTTTCATAGGCCAGAATAATTTATCTATTTAGTGACCTACAGCTGAAC
AATTTTTGTTGTTTGGATCAGAAGAAATCTTTTTAAGGGGACAAAATATT
AATCTCTGAATATTCGGAAGGTTGGTTGCCTCGCTCTTAAGTGATGCGAA
CATAGCATTATTAGATTTTTCGCANAAAAAAAAAAAAAAA
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