FC928853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.413e-32 Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQSM 325 ATD V+SFK+A WFWMT Q PKPSCH VI W PS D +AGRLPG+G+ TNIINGG+ECG+G V++RIGF+ +C + G++LDC NQRP+G L+ ++ Sbjct: 207 ATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.413e-32 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATD + FK+AIWFWMTAQPPKPS H VI +W PS D AGR+PG+G+ TNIINGGIECG G ++ V +RIGF+ +C G+ G++LDCY+QRP+ Sbjct: 167 ATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 265
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.763e-32 Identity = 58/99 (58.59%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+ +C + G++LDCYNQRP+ Sbjct: 222 ATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRPF 320
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.830e-32 Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A R+PGYG+ TNIINGGIECG+G NA V +RIG++ + PGD+LDCYNQR + Sbjct: 153 ATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQRNF 251
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 9.830e-32 Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 +TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIINGGIECG G N A +RIG++ +C G G +LDCYNQR + Sbjct: 161 STDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.284e-31 Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A R+PGYG+ TNIING ECG G N A +RIGF+ +CG + G++LDC NQ+ + Sbjct: 152 ATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.736e-31 Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 +T+P +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG G + V +R+GF+ +C FG+ PG +LDC NQR + Sbjct: 221 STNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.087e-30 Identity = 54/101 (53.47%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQG-GNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 301 ++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG ECG+G ++R+G++ +C F + GD++ C +Q+PYG Sbjct: 154 SSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.854e-30 Identity = 56/100 (56.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 301 A+D +SF +A WFWMT Q PKPSCH V +W PSA+D AGR+PGYG+ TNIINGG+ECG G + V +RIGF+ +C G+ +LDCY+QRP+G Sbjct: 226 ASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDCYSQRPFG 325
BLAST of FC928853 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.202e-29 Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCG 244 ATDPV+SFKSAIWFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +CG Sbjct: 221 ATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301 The following BLAST results are available for this feature:
BLAST of FC928853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928853 ID=FC928853; Name=FC928853; organism=Citrus clementina; type=EST; length=509bpback to top |