FC928857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_XANC5 (Glycogen synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glgA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ +L M+ M + W KK+ Sbjct: 398 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 491
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ +L M+ M + W KK+ Sbjct: 363 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_RHIL3 (Glycogen synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DTV + + + PV + +RRA+ Y + L ++ K GM D+SW+ A+++ Sbjct: 367 DAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQFA-PVTETGMLQAIRRAMHFYQDRKLWTQLQKQGMKSDVSWEKSAERY 468
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 308 D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 367 DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 308 D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV + + S + PV + + +RR + Y L +M K GM D+SW+ A Sbjct: 367 DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV + + + D A++ + RALA Y A +M+ GMAQD SW A+ + Sbjct: 372 ADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAY 474
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 53/137 (38.69%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL+AMRYG+VP+V GGLVDTV G+ F D +PVD + VR A + E+ K GM QD SW A ++ L+ +V G EP D + ++ A P Sbjct: 348 SDAFLMPSRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVDF--YTALVRAWEAFRHRDSWTELQKRGMNQDYSWDRSAVDYD--LMYKDVCGIKEPTPDAALVEQFSQGQAADP 478
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 47/110 (42.73%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + TG G FS PV ++ + + A Y A + NGM D+SWK PA+ + Sbjct: 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTADMLTAALTKTRALYADHATWRNLQINGMTTDVSWKNPAQHY 472
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 46/110 (41.82%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 ADFIL+PS FEPCGL QL AMRYG++P+V TGGL DT V+ Q + + D D V + RAL+ + G + K M QD SW PA + E Sbjct: 1112 ADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLE 1221
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 363 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456 The following BLAST results are available for this feature:
BLAST of FC928857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928857 ID=FC928857; Name=FC928857; organism=Citrus clementina; type=EST; length=707bpback to top |