FC928857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_SALA4 (Glycogen synthase OS=Salmonella agona (strain SL483) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 54/138 (39.13%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 AD L+PSRFEPCG+ QL AMRYG +PIV GGLVDTVE + GS F D +P+D T++ R+ Y Q + ++ M+ SW AK++E L+ +V G EP D E+ + A P Sbjct: 348 ADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPID---FYTSLVRSWEEYRHQKSWKQLQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_NITMU (Glycogen synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 46/123 (37.40%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS------------TTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 338 AD L+PSRFEPCGL Q+++ YGT P+V TGGL+DTV VDC A D A + RA+A Y + + + +M+NGM QD SW+ A + + L+L Sbjct: 382 ADCFLMPSRFEPCGLNQMYSQCYGTPPLVHGTGGLLDTV-------------VDCTAESLADGTATGFVFHELTPEAFLGALERAVAAYRDKPVWDRLMRNGMVQDFSWRASATDYRKIYLSL 491
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D I++PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y + ++ K M Q ++W A+K + NL Sbjct: 375 SDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKK 314 +D IL+PSRFEPCGL QL+ + YGT+P+V GGL DTV + TGF FSV+ +++ +RRA A Y +A ++ K M Q + W A K Sbjct: 375 SDVILVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKADWKKVRKTAMQQKVDWNAAADK 476
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_FERNB (Glycogen synthase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKW 317 D L+PSR+EPCGL Q++++RYGT+PIV TGGL DTV+E + G+ E DP A + + RA+ Y + + ++KN M DLSW AK++ Sbjct: 374 DMFLMPSRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVKEYNPETKEGN-GFGFEGFDP---AHLLKAMARAIYFYNSKEDWNTLIKNAMTMDLSWDKSAKEY 472
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 317 AD +PSRFEPCGL Q+ A+RYGT+PIV TGGLVDTV G GF+ + + A++T R A T MK GM D SW+G A+ + Sbjct: 344 ADAFAMPSRFEPCGLSQMIALRYGTLPIVRETGGLVDTV-PGDVGFRFADATTE----------ALATACRDARTTLEDVVEWQSRMKRGMELDFSWEGSARHY 436
BLAST of FC928857 vs. ExPASy Swiss-Prot
Match: GLGA_CITK8 (Glycogen synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glgA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477 The following BLAST results are available for this feature:
BLAST of FC928857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928857 ID=FC928857; Name=FC928857; organism=Citrus clementina; type=EST; length=707bpback to top |