FC928876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_DROME (Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26 PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.526e-39 Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 599 D+ VIAADTR+S+GY+I +R SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ +AQ+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P LDNQ+ + L A L++ AV + F SA ERDIYTGD + I ++ K GI + LR+D Sbjct: 39 DFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADK--IKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_YEAST (Proteasome component C5 OS=Saccharomyces cerevisiae GN=PRE7 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.519e-36 Identity = 86/204 (42.16%), Postives = 119/204 (58.33%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 599 D+ V+A DTR T YSI +R K+ D VM+++GF AD AL K Y HN K++S A+ + + LY KRFFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ + V LS E + LV+ F SATER I GD LEI+++ K G+ +E+ EL++D Sbjct: 38 DFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_CAEEL (Proteasome subunit beta type-1 OS=Caenorhabditis elegans GN=pbs-6 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.293e-34 Identity = 80/201 (39.80%), Postives = 122/201 (60.70%), Query Frame = 3 Query: 3 DYCVIAADTRMSTG-YSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG-GIHREYMELRKD 599 ++ ++A+DTRM+ +ILTRD KI L D ++ +SGF DV L+K+L +R Y+ + MS A+LLS LYY+RFFPYY+ +L G+D GKG V++YD +G ER+GYS+ G+ +I+PFLD Q+ + L L+ A+ L+K F A ER+I TGDK+ +V+ G + +++ LR+D Sbjct: 61 NFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLSEGYERPELTLDRAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVVKFLPLRED 258
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_TRYBB (Proteasome subunit beta type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.788e-33 Identity = 86/205 (41.95%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTR-DYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 599 +Y V+ ADTR++ + I TR D SK+ KL D+ +ASSG QAD LQ++L R YQ+ + K S +A+L S LY +RFFPYY+FN++ G+D +G G Y+YD VGS E Y + GS S+ + P LD LL Q VT L+ EA+ ++K F A ERDI+TGD + ++ G+ E ELRKD Sbjct: 62 NYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_SCHPO (Probable proteasome subunit beta type-1 OS=Schizosaccharomyces pombe GN=pam1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.998e-31 Identity = 73/202 (36.14%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 6 YCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 599 + ++A DTR GY+I TR ++ ++ D V+ +SGF+AD AL K + R +Y H ++MS A ++ LY KRFFPYY + + G+D EGKG +Y++D VGSYER + GS + I PFLDNQ+ + + + L EA+ + F SA ER I GD + + ++ K G+ + L+KD Sbjct: 24 FAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKLEEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 225
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSB1_ENCCU (Probable proteasome subunit beta type-1 OS=Encephalitozoon cuniculi GN=PRE7 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.354e-26 Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 599 D+ V+A DTR S+ I +R+ SKI ++ D ++ +GF AD + + + I Q++ + ++ A LLS LY KRFFPYYSF VL G + +GK VY+YD +GS+ V GSG ++I P LD+ + + A++ T LS+ + + LV F SA ERD+ T D LE+ V+ + + RE LR+D Sbjct: 100 DFIVVAGDTRHSSSMVINSREMSKIFQVGD-FLLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.309e-18 Identity = 58/188 (30.85%), Postives = 95/188 (50.53%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 566 D V+AAD R S G I R+ +KI K+ + +A +G D+ L +LL A +Y Q K+MS +A LL+N + ++FPY ++ ++GG D + K +Y+ D VG Y++ GSG LD++ K L+ E + L +A +RD+++GD + +V + K G Sbjct: 20 DGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKD-------------NLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEG 192
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.627e-18 Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 12 VIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 581 V+AADTR S G I ++ +KI K+ + +A +G D+ L +LL A +Y+ K+MS +A LL+N L ++FPY + ++GG D + + +++ D VG Y++ GSG LD++ + +S + + L A +RD++TGD L +V + K G ++EY Sbjct: 23 VLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYRE-------------EMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG-YKEY 196
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16 Identity = 52/192 (27.08%), Postives = 100/192 (52.08%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 575 D V+A++ R + G+ I ++ K+ ++ D M ++G D + L +L++ +Y+ + ++ M+ G+ L+SN L R++P ++GG+D G G +Y+ DA+ GS E S+ GSGS + L++Q + ++ E +DL +AT+RD +G+ +++VV+ K R Sbjct: 19 DGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRE-------------NMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKR 196
BLAST of FC928876 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.011e-16 Identity = 56/197 (28.43%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 593 D V+AAD R S G + ++ +KI K+ + +A +G D+ L +LL A +Y Q K+MS +A LL+N L R PY ++ ++GG D + + +Y+ D +G Y + GSG LD++ + L E + + SA +RD+++GD + +V + + G +RE R Sbjct: 20 DGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYRE-------------DLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEG-YRELSNSR 200 The following BLAST results are available for this feature:
BLAST of FC928876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928876 ID=FC928876; Name=FC928876; organism=Citrus clementina; type=EST; length=842bpback to top |