FC928881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22 Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP++SF++ +WFWMTA PSC ++I +W PS D R+PGYG TNI+NGG+EC N AV +RIG++ +CG + Sbjct: 151 VATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNV 236
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.758e-22 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGIQH 264 +A+D +SFK+ WFWMT P PSC ++ +W P+ ND R+PGYG TNI+NGG+ECG ++ V +RIG++ +C G+ + Sbjct: 222 VASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSY 309 HSP 2 Score: 27.7202 bits (60), Expect = 2.758e-22 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG S G +LDCY QRP+ Sbjct: 305 LGVSYGANLDCYNQRPF 321
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 3.223e-22 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +A D V++FK+ +WFWMTA PP PSC ++ +W+PS D RLPGYG TNI+NGG+ECG+ + V +RIG++ +C FG+ Sbjct: 227 VANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGV 312
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.892e-22 Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD +SFK+ LWFWMT PS +++ W PS D R PGYG TNIVNGG+ECG + V NRIG++ +CG FGI Sbjct: 230 VATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGI 315 HSP 2 Score: 28.4906 bits (62), Expect = 7.892e-22 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 248 SLGFSTGDSLDCYYQRPY 301 + G TG +LDCY QRP+ Sbjct: 312 AFGIGTGGNLDCYNQRPF 329
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 97.8265 bits (242), Expect = 7.905e-22 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP +SFK+ +WFWMTA P PS ++ +W PS D R+PG+G TNIVNGGIECG ++ V +RIG++ +C G+ Sbjct: 218 VATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGV 303 HSP 2 Score: 27.335 bits (59), Expect = 7.905e-22 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG G++LDCY QRP+ Sbjct: 301 LGVGYGNNLDCYSQRPF 317
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.956e-22 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +A D V+SFK+ LWFWMTA P PS +++ W PS D P R+PG+G TNI+NGG+EC NA + NRIG++ +C G+ Sbjct: 146 VANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGV 231 HSP 2 Score: 26.5646 bits (57), Expect = 7.956e-22 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPYG 304 LG G++LDC QRP+G Sbjct: 229 LGVDPGNNLDCANQRPFG 246
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.033e-21 Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP +SFK+ LWFWMTA P PS ++ +W PS D R PG+G TNI+NGG+ECG ++ V +RIG++ +C G+ Sbjct: 166 VATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGV 251 HSP 2 Score: 29.261 bits (64), Expect = 1.033e-21 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG GD+LDCY QRP+ Sbjct: 249 LGVGYGDNLDCYNQRPF 265
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATDP++SFK+ +WFWMT PSC ++I +W PS D R+PGYG TNI+NG ECG N A +RIG++ +CG + Sbjct: 151 VATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNV 236
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21 Identity = 39/86 (45.35%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 ++ DPV++FK+ +WFWMT P PSC +++ +W+PS D R+PGYG TNI+NGG+ECG+ +A V +RIG++ +C G+ Sbjct: 212 VSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGV 297
BLAST of FC928881 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.007e-21 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 1 IATDPVLSFKSTLWFWMTAPPPIPSCRELLIDEWKPSSNDVDPRRLPGYGQTTNIVNGGIECGQRGNAAVHNRIGYFTTFCGKFGI 258 +ATD + FK+ +WFWMTA PP PS ++ +W PS D R+PG+G TNI+NGGIECG ++ V +RIG++ +C G+ Sbjct: 166 VATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGV 251 HSP 2 Score: 27.335 bits (59), Expect = 5.007e-21 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 251 LGFSTGDSLDCYYQRPY 301 LG G++LDCY QRP+ Sbjct: 249 LGVGYGNNLDCYSQRPF 265 The following BLAST results are available for this feature:
BLAST of FC928881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928881 ID=FC928881; Name=FC928881; organism=Citrus clementina; type=EST; length=512bpback to top |