FC928901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRCJ (Elongation factor Tu OS=Streptomyces cinnamoneus GN=tuf PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 97/280 (34.64%), Postives = 136/280 (48.57%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGI--DKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 + K H+NI IGHVD GK+T T + L D F++ +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA GV ++ NK D + + V+E+ S + G N V + EGD +W G LL + +NI +P+R DKP +P++DV+ I G GTV GR+E GVLK V G+ TE Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLHDAIPDLNPFTPFDE---------------IDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQSGVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFDGDNCPVVQVSALKALEGDK--------EW--GEKLLGLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDI--IGIKTE 253
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRAU (Elongation factor Tu OS=Streptomyces aureofaciens GN=tuf1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 97/281 (34.52%), Postives = 143/281 (50.89%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 + K H+NI IGH+D GK+T T I K + +++ ++N S +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + +P V +S EGD +W G LL +D ++E P R +DKP +P++DV+ I G GTV GR+E GVLK V G+ TE Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP----DLNAASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSEYDFPGDDLPVVQVSALKALEGDK--------EW--GDKLLGLMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGTVVTGRIERGVLKVNETVDI--IGIKTE 253
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_RHOE4 (Elongation factor Tu OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 100/266 (37.59%), Postives = 143/266 (53.76%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK----EVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG 798 + K H+NI IGHVD GK+TTT I K + + F EA+ ++ +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D DEI++ EV L ++ E+ P +PIS EGD +S LD L+ A+D +I +P R +DKP +P++DV+ I G GTV GR+E G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTA-------AITKVLADAFPDLNEASAFDQ--------IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVDD-------DEILELVEMEVRELLAAQEFD-EEAPVIPISALKALEGDPKWTQSI-LD------LMAAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRIERG 236
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 91/263 (34.60%), Postives = 136/263 (51.71%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGHVD GK+T T I K + ++ + EA + + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + IE DW K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G + G Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTA-------AITKVLAKKGQAEAQDYAE--------IDGAPEERERGITINTAHVEYETEGRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEMIELVEMEIRELLTSYDFPGDDIPVVQVSGLKA---IEGEA--DWETKIDDLMTAVDASIPEPEREIDKPFLMAIEDVFSITGRGTVATGRIERGKVTVG 240
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 87/265 (32.83%), Postives = 139/265 (52.45%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGH+D GK+T T I K + +++ + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + + + +P V ++ F + N D G ++L+ ++ ++E P+R ++KP +P++DV+ I G GTV GR+E G++K G Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFDEIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPALVVALNKCDMVD---DEELIELVEMEVRELLSEYEFPGDDIPVVRVAAFP-------ALNGDAKWGESVLELMNAVDEYIPTPERDTEKPFLMPVEDVFTITGRGTVITGRIERGIVKVG 242
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 96/263 (36.50%), Postives = 142/263 (53.99%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE G++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGII 238
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPU (Elongation factor Tu OS=Mycoplasma pulmonis GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 92/262 (35.11%), Postives = 135/262 (51.53%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGHVD GK+T T + L +K AE YA + D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LL+ +GV +M+ NK+D + E+ E+ S L + G++ +K P + + EG+ E++ L+DA+DN I P + DKP L ++DV+ I G GTV G+VE G L Sbjct: 8 RSKEHVNIGTIGHVDHGKTTLTAAIATVLS----------KKGLAEAKD----YASI-DAAPEEKARGITINTAHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDGPMP-------QTREHILLSKQVGVPKMVVFLNKVDMLEGEDEMIELVEL--EIRSLLSEYGFDGDKTPIIKGSALKALEGNPQYEKNIE-------ELMDAVDNYIETPVKELDKPFLLAVEDVFTITGRGTVATGKVERGQL 238
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 96/263 (36.50%), Postives = 142/263 (53.99%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE G++ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGII 238
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_LACH4 (Elongation factor Tu OS=Lactobacillus helveticus (strain DPC 4571) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 94/265 (35.47%), Postives = 132/265 (49.81%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGHVD GK+T T + L EK A+ S +D E+ERGITI+ A ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V + EGD + L+D +D I P+R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVVRGSALKALEGDKEAQEQI-------LKLMDTVDEYIPTPERQTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVG 241
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_BACC2 (Elongation factor Tu OS=Bacillus cereus (strain G9842) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31 Identity = 90/275 (32.73%), Postives = 135/275 (49.09%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 822 + K H+NI IGHVD GK+T T + + K GG + R ++ +D ERERGITI A ++ET + +D PGH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ + +P + + +G+ +IE T +D Y I P+R +DKP +P++DV+ I G GTV GRVE G++K G VV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVIKGSALKALQGEADWEAKIIELMTEVDAY-----------IPTPERETDKPFLMPIEDVFSITGRGTVATGRVERGIVKVGDVV 243 The following BLAST results are available for this feature:
BLAST of FC928901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928901 ID=FC928901; Name=FC928901; organism=Citrus clementina; type=EST; length=854bpback to top |