FC928905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.135e-13 Identity = 48/190 (25.26%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILT-RDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 566 D +AAD R+ Y LT + +I +L+ C++ +G Q DV + + + +Y Q ++++ A+++S+ LY RF PY+ ++ G + +GK + D +G + + G+ S ++ + +K +SE E + L++ SAT RD Y+G +VVL + G Sbjct: 19 DCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVK-------------PDMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.302e-13 Identity = 53/188 (28.19%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 560 D V+A + R + G I ++ KI ++AD+ M ++G D + L +++ +Y+ + ++ + +A L SN L R+FPY ++GG+D+EGK +Y+ D + G+ E + GSGS L +D TP + EAV+L SA +RD +GD +++V + + Sbjct: 21 DGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIEEKDIVATGSGSLTAYGVL--------------EDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITE 193
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13 Identity = 49/190 (25.79%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 569 D ++A D R S G + ++ K+ K+ D M +G D +A+ +LL A +Y+ + + + A LLSN L+ R FP+ + ++GG D +++ D +G E +++ GSGS + L+ +S E + L SA ERD ++G+ + + V+ K G+ Sbjct: 16 DAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYD-------------RDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGV 192
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 52/186 (27.96%), Postives = 87/186 (46.77%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 560 D V A + R S G I + KI K+ + +G AD ++L K L A +Y+ ++++++S A L +N L+ RF+P+ +LGG+D G +Y+ D G + S GSGS + L+++ L EAVD+ SA ERD Y+G+ + + + + Sbjct: 19 DGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSD-------------ELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTE 190
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB3_PICMA (Proteasome subunit beta type-3 OS=Picea mariana GN=PBC1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 15 IAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 341 IA+D R+ + D+ +I K+ DK + SG DV+ L + A RH +YQ + + M A L+S LY KRF PY+ V+ GL + K + T D++G+ E Sbjct: 22 IASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFICTMDSIGAKE 130
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB3A_ARATH (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11 Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 15 IAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 341 IA+D R+ + D+ +I K+ D+ + SG DV+ L + L RH +YQ + + M A L+S LY KRF PY V+ GL ++ K + T D++G+ E Sbjct: 22 IASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKE 130
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 54/196 (27.55%), Postives = 85/196 (43.37%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 590 D ++AAD+R + G I R K+ +L D SG AD + + LL +Y+ Q S A L S Y + ++ G D + G VY+ GS + + GSGS I F D + +++ EAV+ +K A A ERD +G + +V+LNK G+ R++ + Sbjct: 34 DGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGL-IVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFREN-------------MTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMERKFFAI 215
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB3_SCHPO (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe GN=SPCC63.12c PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 3 Query: 9 CV-IAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 332 CV IA+D R+ LT ++ K+ + DK + +G DV+ L +L + +Y+ + +Q+ A L+S+TLY KRF PY+SF V+ G+ N+ + +D++G Sbjct: 19 CVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDSIG 127
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSMB_SULSO (Proteasome subunit beta OS=Sulfolobus solfataricus GN=psmB PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 51/194 (26.29%), Postives = 94/194 (48.45%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ--MSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 578 D ++AAD R S G+ + + K+ + DK + ++G AD++ + +L +++ + + K +S G+A L+N L ++FPY ++GG D++ + ++ D +G Y + GSGS + M L+++ L EA DL K SA +RD +TG + + ++ G H E Sbjct: 24 DGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL--KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL-------------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 199
BLAST of FC928905 vs. ExPASy Swiss-Prot
Match: PSB6_YEAST (Proteasome component PRE3 OS=Saccharomyces cerevisiae GN=PRE3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 51/191 (26.70%), Postives = 86/191 (45.03%), Query Frame = 3 Query: 3 DYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 575 D ++ AD+R +TG I R K+ ++ DK SG AD +A+ ++ +Y Q+ + A + L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I + D + +S+ E VD +K + A + D +G + +VVL G+ R Sbjct: 29 DGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 204 The following BLAST results are available for this feature:
BLAST of FC928905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928905 ID=FC928905; Name=FC928905; organism=Citrus clementina; type=EST; length=859bpback to top |